LOCUS       JO178684                 560 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33540_c_s
            mRNA sequence.
ACCESSION   JO178684
VERSION     JO178684.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          130 a          137 c          153 g          139 t
ORIGIN      
        1 cagcggcaat tcaggtgtgc tgcttattgc accaacgata taaggacttc tccacagccc
       61 ttgtggcagc tcttgtgaaa gcgcttgctc ctggaaggcc catagacgat ggggatggcc
      121 tagaccgtag ttcacggctg cataagaagc ggatgaccct ccgccttttg gtggagcttt
      181 acatttgcgc tgtctacaac aatgtatccg tcctcacctc catgttgaag gaactgatag
      241 tccaggagca cttgaaggac agagaagcca cacaggtcaa tctgcccctg gttctcaatt
      301 ttgccaagac ggcgaaggac acactcggcc taatggtcga cgaggaagaa gccaaggaga
      361 aggtaacatg agctttctac cttgatctta actttcttgg tcgaggtgtt gtggacgcgg
      421 tgcttgcttg tggccatgat gatgccaacg atgagctgag ttggtgaccc ttgtatgtcg
      481 ttgkaggcag gttcaatgca gtggtgcaat cgacttctta tcaacggccc cagcatggca
      541 aagttactgt ggccgcttca
//