LOCUS JO178684 560 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33540_c_s mRNA sequence. ACCESSION JO178684 VERSION JO178684.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 560) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 560) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..560 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 130 a 137 c 153 g 139 t ORIGIN 1 cagcggcaat tcaggtgtgc tgcttattgc accaacgata taaggacttc tccacagccc 61 ttgtggcagc tcttgtgaaa gcgcttgctc ctggaaggcc catagacgat ggggatggcc 121 tagaccgtag ttcacggctg cataagaagc ggatgaccct ccgccttttg gtggagcttt 181 acatttgcgc tgtctacaac aatgtatccg tcctcacctc catgttgaag gaactgatag 241 tccaggagca cttgaaggac agagaagcca cacaggtcaa tctgcccctg gttctcaatt 301 ttgccaagac ggcgaaggac acactcggcc taatggtcga cgaggaagaa gccaaggaga 361 aggtaacatg agctttctac cttgatctta actttcttgg tcgaggtgtt gtggacgcgg 421 tgcttgcttg tggccatgat gatgccaacg atgagctgag ttggtgaccc ttgtatgtcg 481 ttgkaggcag gttcaatgca gtggtgcaat cgacttctta tcaacggccc cagcatggca 541 aagttactgt ggccgcttca //