LOCUS JO178577 473 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33258_c_s mRNA sequence. ACCESSION JO178577 VERSION JO178577.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 473) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 473) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..473 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 97 a 140 c 148 g 87 t ORIGIN 1 cgccgagtgg aacaagcacg cgacgcctgc gggcctctcg cgcgagttct tcgtggcggg 61 cctcaagagc atcggcgtgt cggacgtgag cgtcgagcag gcgtgggacc tctggaccga 121 gatggtgaag gagacggtcg actaccgcga ctttggctgc gcgctctcca ccgtcatcaa 181 gggcaccatc gacgacctca ctgcgttcat cttctggcag tactcagagg gcaagggctt 241 cctgacacaa gctgacgtcg agaaaatctt ccgcactatt tacatgctcg gagacaggtc 301 gccgagcgat caggagctta gaatccgaat gagcgagatg ttcccaacgg catccgatcg 361 gcttacggng gaggagtgga agcgcggtat tgctgcgcag aacacgttcc tcatgtgcct 421 gctcgccccg cagcagcgcc cccaccaggt ggcctagatg acgagttcta gat //