LOCUS JO178487 665 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33066_c_s mRNA sequence. ACCESSION JO178487 VERSION JO178487.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 665) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 665) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..665 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 208 a 122 c 144 g 191 t ORIGIN 1 cgggattaac attgaagatc ttggttttgc attagtttca gttgatcaaa cagatgatga 61 acgctatgtc tcaatcaaag agccatattc atttgaggtg tttcgtggct ggttaaagaa 121 gattgaagca ccgtatgtcg acgaatatga acaagatttg aaaaaactgg caggcccaat 181 gcaccatgca aaccctgctg aaaaaggcta tgcatttgag cgcttagtgg ctgcattaat 241 gctccaattc cccaacactg ataaaatacg agatctgcca attctaaaag gagttgtttt 301 tgacgacaaa gcacctgatt ggttgaacca gcctttccaa aacaactgga ctcgcttggg 361 atcctcaatg gagcatagtg ctgtgtttag tgcattattc aaggttttaa tgcaaatcaa 421 gttcaacgaa gccacacctg agcaaataca ggttgcacta aatggaacaa ttcttgagaa 481 actcttttca gatgacaagg caagaaatga tcaagtaatt gatgttttga agaagataat 541 ggcatgcaaa gaagaatatt ggggtgagct ccttttgttg cttactcaat atgaaaatga 601 gctactgctt ccctcaaagt attatggccc tgatgtgatt ggcttttatg gtggaattct 661 cttca //