LOCUS JO178338 480 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c32720_c_s mRNA sequence. ACCESSION JO178338 VERSION JO178338.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 480) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 480) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..480 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 87 a 140 c 165 g 88 t ORIGIN 1 atggccaagc gcctgtatgc tgcggagagc agtctgtggg gctccctttc tccgcggggc 61 ggcggcccca tccaggtgtc cgcaccgcag cacacgatgg agacacctgt cggcggcccc 121 atgaacatga tgccaggtgg cgtgccggag cgggctgcgg cggggaaggc tgctgcttcg 181 ctggctccag ctggtggcgg caaaggccgt cccgggcaac ccacgtcccc aaagtcgccg 241 aattcccggg aactggaagc acagcttcag aaccagagga tcctcgaagt cacaagggtg 301 ttggcggagg tctgtgcaga gagtaacgct gttggcgaca actcgacgcc ccctcaccag 361 tgagaacggt caaggtgtat acttgccttc ccaggatgag ttgggagccg gttggtgctg 421 agttgaacat gtcgtgcata ctgttgtggg ctgctgtcgg gtggcatgaa gccgcccctc //