LOCUS JO177812 569 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c31547_c_s mRNA sequence. ACCESSION JO177812 VERSION JO177812.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 569) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 569) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..569 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 138 a 141 c 165 g 125 t ORIGIN 1 tggacttcac cacagacaaa ctgcggtcgc tggttcgcaa gtggcaaagt ttgattgagg 61 ctcacgttga tgtcaaaacc actgacaact acacgctgcg ccttttctgc atcggcttca 121 ccaagaagcg accaaaccag atcaagaggt cttgctatgc gcaaactgct cagatccgcc 181 agatccgcaa gaagatgcgg gagattatga tctctcaggc atcaagctgc gatctgaagg 241 acttggtcgc caagttcatc cctgaggtga tcgggaagga gattgagaag gctgctgcag 301 gtatctaccc gttgcagaac accttcgtca ggaaggtgaa gattctgaag gcacccaagt 361 ttgaccttgg caagctcatg gaggtgcatg gcgactatgc tgaggaggtt ggcgccaagc 421 ttgagcgccc tgcagaggag gccggaggag gctgagacac ctgcggagcc tgtcggtgcc 481 tagggtagcg attgtgtgcc atagcatgca ctgtgtgaca ttgttgtaag caactactgc 541 tgttatgctc gctactgcct gcctaaacg //