LOCUS JO177724 523 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c31362_c_s mRNA sequence. ACCESSION JO177724 VERSION JO177724.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 523) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 523) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..523 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 86 a 212 c 133 g 91 t ORIGIN 1 agcgctacac caatctcgtg ccggagacga cactcgcnag agcggaggcg cgccctccgg 61 ccctcggacg ctgcaactct aaagcactac cgtctcctcc tcgctgaggt gcgtggcgtc 121 gcagattggg ctgaacagct ccggcaagcg cagtacgatg atagtgtgca cgctgccagc 181 ttccttgcac tctggaatgc gctccgcccc gacacaccag cgccgcccat cccgtcgcct 241 gcgtggggcg agcttgggtt ccaaggaaag gaccccgcca ccgatctacg tggcagcggc 301 ctcgcgggcc tcacgtttct cctctacttc gccgagacct tcccggactc tgcacggcgc 361 tccttgctcc aggcgtcgca cccgcagcac tggatgccct tcgcttgcgc aggcatcaac 421 ctcaccgcct tcttgctccg cgatctcctc aacacacccg accccacgcg ctgtctcctc 481 gctccgcacc tcctgcacca cggcaccacc ccagagcaac tcc //