LOCUS JO177534 477 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c30910_c_s mRNA sequence. ACCESSION JO177534 VERSION JO177534.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 477) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 477) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..477 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 67 a 168 c 164 g 78 t ORIGIN 1 cgcgcagggg ctgtcggtcg ggctcgccga ggcagccgag ctgccgcgtg cagacgacgt 61 ccggacctat gcgctcaatg cagcgtcggt ggccctgctg accgaactga aggtgtggga 121 cagcctgccg cccgacgcgg tcagtcccgt cctacgacat ggtcgtctgc ggtgacgcga 181 cgaccgatca gccggccggc cgcctcagtt tctcggcttg gcagcaaggt gtacgcgagc 241 tggcggtcat cgtcgatgcc gcggccctcg acgcacaact cgcgacggcc ctgcgcttct 301 caccccatgt gcgccaggta cctgccgata cacctgccgc gctgaccgcg ctgtgcgagg 361 gccgcaactc cgccgcgcgt gatgcgctcg gtgtcgcgtt cgagcccaag gcctatggtc 421 atcgtgcggt ggcgacccgg ctggtgtcgg accaaccgca tcaaggcgtg gcgacgt //