LOCUS JO177236 453 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c30221_c_s mRNA sequence. ACCESSION JO177236 VERSION JO177236.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 453) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 453) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..453 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 83 a 97 c 144 g 129 t ORIGIN 1 ttccgccaac ttgggccggg catggcactt caatccgcct ttgagtgtac tagatctgtg 61 gggtgtagat tgacattcct gtgctcagca ggagcaggac atctcatgct tggatggggg 121 ggaggagaga ggtcaccatc tatgtgcctg gccctcacga gctgtaggga cgtgtgttct 181 tccacatggg ggtggacggc cgttttctag ctctatgcat tagaaatgga gctggctttg 241 ttccatgtga attgcaccgt gtggcgctcg aggcttcttt gggcattggg ccaatgtgca 301 cacctcaaga gtttgttcgg gtcaccacag aaagaatttt tgcctatttg ttagagatct 361 tgtctgttgg acagtataga agatgaggtg tggacgggct ccgtccggct ctcgtgatgg 421 ggcccgttgg tttgggggca cgtttgtact ata //