LOCUS JO177108 472 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c29967_c_s mRNA sequence. ACCESSION JO177108 VERSION JO177108.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 472) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 472) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..472 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 103 a 101 c 154 g 114 t ORIGIN 1 cggaaagggg ggccagaaga cacgagggca gtgatgatcg cccccgtccg gggcctcttc 61 gagcgcgctg tgtgcctgga gctgcctctc aagaagatga agttcctctt caagcgctac 121 ttggatttcg agtcggagct accagcggag ctcggggagc cggaccttgt gcgggagaag 181 gccatggact atgtcaaatc gcatgtgggc cccccgggga gaggggatgg atgatggggg 241 ggagtttttg aggagaactt ggctttgacc gagtctcgca ggatgtctag tcccctccca 301 gcaaattgtt tgtgataggt ttcctttgag gttctacgtg tgtgggcgca cagcaatcac 361 gaagtttggc atcgcaaaaa gaaatctgaa agagaagtgc ttttaatagg gccattgatg 421 acaacaattg tttgtgtcag gctttgtgaa cgtgctctgg tctagtaatt tg //