LOCUS       JO177108                 472 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c29967_c_s
            mRNA sequence.
ACCESSION   JO177108
VERSION     JO177108.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          103 a          101 c          154 g          114 t
ORIGIN      
        1 cggaaagggg ggccagaaga cacgagggca gtgatgatcg cccccgtccg gggcctcttc
       61 gagcgcgctg tgtgcctgga gctgcctctc aagaagatga agttcctctt caagcgctac
      121 ttggatttcg agtcggagct accagcggag ctcggggagc cggaccttgt gcgggagaag
      181 gccatggact atgtcaaatc gcatgtgggc cccccgggga gaggggatgg atgatggggg
      241 ggagtttttg aggagaactt ggctttgacc gagtctcgca ggatgtctag tcccctccca
      301 gcaaattgtt tgtgataggt ttcctttgag gttctacgtg tgtgggcgca cagcaatcac
      361 gaagtttggc atcgcaaaaa gaaatctgaa agagaagtgc ttttaatagg gccattgatg
      421 acaacaattg tttgtgtcag gctttgtgaa cgtgctctgg tctagtaatt tg
//