LOCUS JO168790 518 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c13710_c_s mRNA sequence. ACCESSION JO168790 VERSION JO168790.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 518) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 518) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..518 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 120 a 164 c 134 g 100 t ORIGIN 1 gggattatga ctccaataac aagccctaca caacctacga gatttccacc gagactacat 61 tcccgcagta caagaagcgc atgaacaacg ttcgcaggag gtacagcgat tttgccgctc 121 tcgacaggca cctccgcacg cgcatcgaag agacagaaga ggcgcgcaag cacggaccga 181 ttgtcgacct gcccggagac actgtcgcct ccttctttgg ccccggtcgc tttgacgccg 241 cgttcattgc tgagcgccgc aagggcctcg agaagtacat caatgccgct gcaaaccaca 301 ctttctgtcg gttcgacaag gagctccagg actttttgca agatcccaag tgggacgcat 361 ccaagttgag cacggcacag aagggctggt ggtaagctcc tctctgttct ctctccgtca 421 ccatattgta ccccgtatag cggacgacct ccgcgcactc atcgggcaga tacgaaccgg 481 tctgccgagc gccacggctt gcgagagatc tccgatcg //