LOCUS       JO168790                 518 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c13710_c_s
            mRNA sequence.
ACCESSION   JO168790
VERSION     JO168790.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          120 a          164 c          134 g          100 t
ORIGIN      
        1 gggattatga ctccaataac aagccctaca caacctacga gatttccacc gagactacat
       61 tcccgcagta caagaagcgc atgaacaacg ttcgcaggag gtacagcgat tttgccgctc
      121 tcgacaggca cctccgcacg cgcatcgaag agacagaaga ggcgcgcaag cacggaccga
      181 ttgtcgacct gcccggagac actgtcgcct ccttctttgg ccccggtcgc tttgacgccg
      241 cgttcattgc tgagcgccgc aagggcctcg agaagtacat caatgccgct gcaaaccaca
      301 ctttctgtcg gttcgacaag gagctccagg actttttgca agatcccaag tgggacgcat
      361 ccaagttgag cacggcacag aagggctggt ggtaagctcc tctctgttct ctctccgtca
      421 ccatattgta ccccgtatag cggacgacct ccgcgcactc atcgggcaga tacgaaccgg
      481 tctgccgagc gccacggctt gcgagagatc tccgatcg
//