LOCUS       JO167811                1214 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c12023_c_s
            mRNA sequence.
ACCESSION   JO167811
VERSION     JO167811.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          230 a          384 c          359 g          241 t
ORIGIN      
        1 aaggcggcaa ctggagagcc ttccctgacc tgtgtcccca caggcttgct cccctctcgg
       61 agggtcgcat cgacgagacg ggctgcctcc agtgctccta ccacggctgg tcctttgatg
      121 gcgagggaaa ctgcacttcc attcctcaag ccaagtctga ggggccggag gcgcgcgcta
      181 aggagtcgga gagggcagcg tgtgcatccc tacccactcg agagttcttc gggtgtttgt
      241 gggtgtggcc ggacaagaag acggccgatc tcgcggctaa gacgccactt ccgagtccac
      301 cagaagagtt cgatgacccg agttttgcga ctgctgccat tcagcgcgac ctctactaca
      361 actttgacac cctcatggag aatgtggctg acccatcgca cattcactat gcgcatcaca
      421 aggtgactgg gcggcgtgat aaaggcaagc ccatgcccct cacagtcgag gccctgggcc
      481 ctgccggctt caagggcgcc ggagaggcag ggcctcggga tgggggaggc atcacggccg
      541 agtttgtggc gccgtgcatg ttcgtcaacc ggatcaccat cccgaggcca actggccctg
      601 cctggcagat caccctctgc tccttcactg tgcccatggc ccccggccgc tcgcgctcca
      661 tcctcgtcag cacgcgcaac ttcttccagt tcctcatgcc ggggcccaac tggtggaata
      721 tcatgccgag gtggttggag catatgaccg ccaataaggt gtacgatgga gacatgatcg
      781 tcctccaggg acaggagaag attttgatgc agcttggagc atctggcaag ggaggggtca
      841 ccggcaagga gtacacgcgc ctcaccttca cacccaccgg ggccgaccgc ctggtgctgg
      901 cgttccggaa ctggctcgcc aagtacggcg gcgggggcct gcgtggtcct cggacgcttt
      961 gctcggggcg ccgcccccta gcacgtcgct caccaagcaa gagatgctgg atcggcgcac
     1021 acaacacaca gaagtgtcca cgttggcacc atacttcttc acaaactgga agacgttctt
     1081 gccctttgcc ttctggccct gggcatcaac cttgaacttc gcatctccgt tgatgccata
     1141 gggggtcttc gtgttcaact tcttcacatt gttgctgatc accaatgacc tgcgggcagc
     1201 aactggccgc ctgg
//