LOCUS JO167811 1214 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c12023_c_s mRNA sequence. ACCESSION JO167811 VERSION JO167811.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 1214) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1214) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1214 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 230 a 384 c 359 g 241 t ORIGIN 1 aaggcggcaa ctggagagcc ttccctgacc tgtgtcccca caggcttgct cccctctcgg 61 agggtcgcat cgacgagacg ggctgcctcc agtgctccta ccacggctgg tcctttgatg 121 gcgagggaaa ctgcacttcc attcctcaag ccaagtctga ggggccggag gcgcgcgcta 181 aggagtcgga gagggcagcg tgtgcatccc tacccactcg agagttcttc gggtgtttgt 241 gggtgtggcc ggacaagaag acggccgatc tcgcggctaa gacgccactt ccgagtccac 301 cagaagagtt cgatgacccg agttttgcga ctgctgccat tcagcgcgac ctctactaca 361 actttgacac cctcatggag aatgtggctg acccatcgca cattcactat gcgcatcaca 421 aggtgactgg gcggcgtgat aaaggcaagc ccatgcccct cacagtcgag gccctgggcc 481 ctgccggctt caagggcgcc ggagaggcag ggcctcggga tgggggaggc atcacggccg 541 agtttgtggc gccgtgcatg ttcgtcaacc ggatcaccat cccgaggcca actggccctg 601 cctggcagat caccctctgc tccttcactg tgcccatggc ccccggccgc tcgcgctcca 661 tcctcgtcag cacgcgcaac ttcttccagt tcctcatgcc ggggcccaac tggtggaata 721 tcatgccgag gtggttggag catatgaccg ccaataaggt gtacgatgga gacatgatcg 781 tcctccaggg acaggagaag attttgatgc agcttggagc atctggcaag ggaggggtca 841 ccggcaagga gtacacgcgc ctcaccttca cacccaccgg ggccgaccgc ctggtgctgg 901 cgttccggaa ctggctcgcc aagtacggcg gcgggggcct gcgtggtcct cggacgcttt 961 gctcggggcg ccgcccccta gcacgtcgct caccaagcaa gagatgctgg atcggcgcac 1021 acaacacaca gaagtgtcca cgttggcacc atacttcttc acaaactgga agacgttctt 1081 gccctttgcc ttctggccct gggcatcaac cttgaacttc gcatctccgt tgatgccata 1141 gggggtcttc gtgttcaact tcttcacatt gttgctgatc accaatgacc tgcgggcagc 1201 aactggccgc ctgg //