LOCUS JO167796 796 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11991_c_s mRNA sequence. ACCESSION JO167796 VERSION JO167796.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 796) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 796) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..796 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 160 a 231 c 223 g 175 t ORIGIN 1 tttataaacc tcaactaagc atcctatcgc cccccgccct ccaaaggggt gaataaacaa 61 atgcaacaca caatgagcaa aataagcaat ggcataatct gcttcaacca ctaactagca 121 ttgcgaccgc gtccattgcc tcgtgttgga atcaatcttc cgcatgttac aatcatgtgt 181 gcttcttaca aagtgcaacc gtggtggtat cagatcgcac caaggttcct acacggggtt 241 gccccagaag tcatactcgc aggaaccgtc gtcgctccgg gcggtcgggt catagttcac 301 tgcctggggg tcggtgcaac ccgctgggac cgggacattc acatgttgtg ctgccttgcc 361 tgggatttca cccaagcgat aggtgtttgg ggtgctcatg cagccttgcc atagaagttg 421 cccgacttga tggcgtcctg gttggcgtct cccagagccg ccgagtggag gtaggtgtcg 481 gccagctgca cgcgcttgac attctcctgc tcttgcacga gcatgtagcc gtactgcatc 541 agcgtgtcga tgttcatctc gggcttggca aacgtggggg ggccctcctt ggwsyygaks 601 agmttcttgc caatgttctc cacaccgatc gaggccaccc acttgcggac ctcgtcgtcg 661 tacacgcgcg cgcggagggc gccgaagaaa tcaatggact ggccggggaa ctcgtccacc 721 agcttgacga cgtcggagct ctggacgcgt cgttgctgaa gatcccctgg cagacgccga 781 tgcggtcgtc gcgcgg //