LOCUS JO167671 445 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11788_c_s mRNA sequence. ACCESSION JO167671 VERSION JO167671.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 445) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 445) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..445 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 119 a 104 c 97 g 124 t ORIGIN 1 gcaacagaag tacatagtaa tacaatgcca agtcattaag tgaatatctt tcattgtgcc 61 taagctctag gatcatatgt ggtcgtgaac atgccatata tggcacatgt cacacaacat 121 ggtcacggac ntcatttcaa aggatgtaat tgctcattac aatgaaagcc tgtcccaagc 181 aaaattcttc ttcgtggacg gtccatttgt gacaggtaac ctaggataca catgttgatg 241 ctatcacact caacacgatg aagtaatgtt gtcaatcacg caacacaatg aagttgccag 301 taggtgtttt ctccatgcga gagattgcct tcattgtgga tgcgaacgct tgcttgtctt 361 caggtgtctt gatgtatctc ttgaacttgg ccaccaggtc attgctcgtg atgggccccg 421 actgctgcag cacccgccgc agctc //