LOCUS       JO167671                 445 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11788_c_s
            mRNA sequence.
ACCESSION   JO167671
VERSION     JO167671.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          119 a          104 c           97 g          124 t
ORIGIN      
        1 gcaacagaag tacatagtaa tacaatgcca agtcattaag tgaatatctt tcattgtgcc
       61 taagctctag gatcatatgt ggtcgtgaac atgccatata tggcacatgt cacacaacat
      121 ggtcacggac ntcatttcaa aggatgtaat tgctcattac aatgaaagcc tgtcccaagc
      181 aaaattcttc ttcgtggacg gtccatttgt gacaggtaac ctaggataca catgttgatg
      241 ctatcacact caacacgatg aagtaatgtt gtcaatcacg caacacaatg aagttgccag
      301 taggtgtttt ctccatgcga gagattgcct tcattgtgga tgcgaacgct tgcttgtctt
      361 caggtgtctt gatgtatctc ttgaacttgg ccaccaggtc attgctcgtg atgggccccg
      421 actgctgcag cacccgccgc agctc
//