LOCUS JO167610 644 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11686_c_s mRNA sequence. ACCESSION JO167610 VERSION JO167610.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 644) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 644) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..644 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 163 a 131 c 177 g 165 t ORIGIN 1 cacaaaagca ttggttgccg tcgaattgtc ggagacgcgc gggtcttact ggcccgcgar 61 yksmcrggmk gttcagttga cagtggatca caagcccaat gtggaagagg agagggtgcg 121 gattgagaag aaaaacccca accccaaaaa acctctggtg tcatatgctg gcggaacttg 181 gcgtgtcggt ggccttcttg ccctctcccg tgcatttggc gacgtgtatt tgaaagactg 241 gactgatggg cagaagaatg gcgctcgggg tggctatgga ttgacggcag agcccagcat 301 agccttggaa caactaagtg ttgatgacac ttggctgatt ctagggacag atggtctttt 361 tgaggcaatg aggaatcagg acgtggtgga cttttgtgtc gcatcaccat catcggaaaa 421 ggttgaggat gttgtgaaac ggttgatcaa ggaagcgcaa aggcgcggat ctactgatga 481 tgttgcagca atagcaatta ggttatgaga cacttcgaca gtccaccaag tgatatgcta 541 gtgtagtctt tctacattct tattactata agtttctcct tgacattgct aacaatcaac 601 aaaggttgtt tttaaccaca ttcatctaat gtgtcccatt gcgt //