LOCUS       JO167610                 644 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11686_c_s
            mRNA sequence.
ACCESSION   JO167610
VERSION     JO167610.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          163 a          131 c          177 g          165 t
ORIGIN      
        1 cacaaaagca ttggttgccg tcgaattgtc ggagacgcgc gggtcttact ggcccgcgar
       61 yksmcrggmk gttcagttga cagtggatca caagcccaat gtggaagagg agagggtgcg
      121 gattgagaag aaaaacccca accccaaaaa acctctggtg tcatatgctg gcggaacttg
      181 gcgtgtcggt ggccttcttg ccctctcccg tgcatttggc gacgtgtatt tgaaagactg
      241 gactgatggg cagaagaatg gcgctcgggg tggctatgga ttgacggcag agcccagcat
      301 agccttggaa caactaagtg ttgatgacac ttggctgatt ctagggacag atggtctttt
      361 tgaggcaatg aggaatcagg acgtggtgga cttttgtgtc gcatcaccat catcggaaaa
      421 ggttgaggat gttgtgaaac ggttgatcaa ggaagcgcaa aggcgcggat ctactgatga
      481 tgttgcagca atagcaatta ggttatgaga cacttcgaca gtccaccaag tgatatgcta
      541 gtgtagtctt tctacattct tattactata agtttctcct tgacattgct aacaatcaac
      601 aaaggttgtt tttaaccaca ttcatctaat gtgtcccatt gcgt
//