LOCUS JO167373 589 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11251_c_s mRNA sequence. ACCESSION JO167373 VERSION JO167373.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 589) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 589) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..589 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 139 a 113 c 213 g 115 t ORIGIN 1 cgggagagaa ggaggaggag gaggaggtgg aggagagcct gtgctgggta gacgaagcgc 61 tgggctacgt ggcggtggat gtgggcgtgg gcgcagacga gctgtaccgg ttcattgarr 121 ywsmsgggmw ggcagcgctg ggggtgcgca cgcggcacgt gcagcaggag cagcgtgcag 181 cgcagctgac agagcacgtg aggcggcagc tgcagctgcg caggctggac catgatgcat 241 gggtaagccg agatcaatac aactcttgtt gtgcaaggtt gttgcgatat gcatcagatc 301 ttcggcaata cacggaaggc ctgcatatac gtgtatcaga cgagagtcgg ttgcctcggc 361 cagaggacac cggtgcggcc atgaaactca agtggagctt caatttgggt agctttatgt 421 aatcgtaatg cgagtgcaat aatgttgaac tatgggtcct ccaaaggagg tgtggacaaa 481 gaggatggca acgagccatg cattatttga tgcaatgtgt ggaggatgac tatgaccacg 541 gttatagtgt ggtggcaatg acaatgccta ccaacaatgg tgggggtgg //