LOCUS JO167259 407 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c11068_c_s mRNA sequence. ACCESSION JO167259 VERSION JO167259.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 407) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 407) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..407 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 124 a 96 c 91 g 96 t ORIGIN 1 gaagatgagt tcttagtttc acgattatac caaagttaca cagcccatcc tgaactggga 61 cgacgattgc cgccggagtt gtggcaagac aatatcgtac cagacgaaga agagccaagt 121 tattcgtatc tacacgacag atcagacgaa gaatcgagtc acacctcaca tacaggcacc 181 actgatggat cgcgaccacg acgaaagcgt cctttgtccc cgtcttcgga atcaagccat 241 ccgcctaaac gagcgagagt tgaacgccga gacgacgatt ttattcgtga ttatgacagg 301 cacatcacag gcttaaacat gtgaggaact tgattaagct ttttatgtat tgtatgcgga 361 accattccta aataaatgta acgcaggagt ttacctgcat tacttag //