LOCUS JO166967 530 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c10567_c_s mRNA sequence. ACCESSION JO166967 VERSION JO166967.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 530) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 530) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..530 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 120 a 147 c 180 g 82 t ORIGIN 1 cgtagctgac aatgcagtcc tctgtgattg aggatgccca cggcctcgtg tcctccgatg 61 gcgtgggcaa gaagcgcgtc atccacgatg tgaccagtct cagctctctg gccgacaagg 121 tgcactcgga gcggcatcga tgtccggctc cgcgccctcg cccggcgccg ttctcggaga 181 cgagaagctg gagaagagag ccaagcggct agcaaagaat cgtgaggcgg cacagatgtt 241 ccgtcagcgt cagaaggtct acattcagga tctagagaag cgtacgacgg acttgacggc 301 ggagaacgcc tcgttgcggg ccaaggtgga gctgctcagc gccgagaaca aggtcatccg 361 cgatcagctg gcctacctgc gctctgtcat tggcaacgcg gtgcagatca acatggataa 421 gatgccgcag gcagcgaagg gcgccggagg cggsagagtc gacgaccagg acagccaggg 481 acgaatagcg gcgggcccga acggagagct gagctgcgca tgtagataga //