LOCUS JN713925 1351 bp DNA linear BCT 22-AUG-2013
DEFINITION Bacillus sp. DR90 16S ribosomal RNA gene, partial sequence.
ACCESSION JN713925
VERSION JN713925.1
KEYWORDS .
SOURCE Bacillus sp. DR90
ORGANISM Bacillus sp. DR90
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE 1 (bases 1 to 1351)
AUTHORS Asoodeh,A., Alemi,A., Heydari,A. and Akbari,J.
TITLE Purification and biochemical characterization of an acidophilic
amylase from a newly isolated Bacillus sp. DR90
JOURNAL Extremophiles 17 (2), 339-348 (2013)
PUBMED 23430382
REFERENCE 2 (bases 1 to 1351)
AUTHORS Asoodeh,A. and Alemi,A.
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2011) Department of Chemistry, Faculty of
Sciences, Ferdowsi University of Mashhad, Vakil Abad, Mashhad,
Razavi Khorasan 9177948974, Iran
FEATURES Location/Qualifiers
source 1..1351
/organism="Bacillus sp. DR90"
/mol_type="genomic DNA"
/strain="DR90"
/isolation_source="Dig Rostam hot mineral spring"
/db_xref="taxon:1097306"
/country="Iran: Kerman"
/collection_date="17-Sep-2011"
/collected_by="A. Asoodeh"
/PCR_primers="fwd_seq: agtttgatcctggctcag, rev_seq:
ggcttaccttgttacgactt"
rRNA <1..>1351
/product="16S ribosomal RNA"
BASE COUNT 323 a 336 c 437 g 255 t
ORIGIN
1 tcgagcggat gaaggagagc ttgctctccg gattcagcgg cggacgggtg agtaacacgt
61 gggcaacctg cctgtaagat cgggataact ccgggaaacc ggggctaata ccggatggtt
121 ccttcctccg catggaggaa ggcggaaaga cggtttcggc tgtcacttac agatgggccc
181 gcggcgcatt agctagttgg tggggtaacg gcctaccaag gcaacgatgc gtagccgacc
241 tgagagggtg atcggccaca ctgggactga gacacggccc agactcctac gggaggcagc
301 agtagggaat cttccgcaat ggacgaaagt ctgacggagc aacgccgcgt gagcgaagaa
361 ggccttcggg tcgtaaagct ctgttgtaag ggaagaacaa gcatcggtta actgccggtg
421 ccctgacggt accttaccag aaagccacgg ctaactacgt gccagcagcc gcggtaatac
481 gtaggtggca agcgttgtcc ggaattattg ggcgtaaagc gcgcgcaggc ggtcctttaa
541 gtctgatgtg aaagcccacg gctcaaccgt ggagggtcat tggaaactgg gggacttgag
601 tgcagaagag gaaagcggaa ttccacgtgt agcggtgaaa tgcgtagaga tgtggaggaa
661 caccagtggc gaaggcggct ttctggtctg taactgacgc tgaggcgcga aagcgtgggg
721 agcaaacagg attagatacc ctggtagtcc acgccgtaaa cgatgagtgc taagtgttag
781 ggggtttccg ccccttagtg ctgcagctaa cgcattaagc actccgcctg gggagtacgg
841 ccgcaaggct gaaactcaaa ggaattgacg gggacccgca caagcggtgg agcatgtggt
901 ttaattcgaa gcaacgcgaa gaaccttacc aggtcttgac atcctctgac caccctggag
961 acagggcctt ccccttcggg ggacagagtg acaggtggtg catggttgtc gtcagctcgt
1021 gtcgtgagat gttgggttaa gtcccgcaac gagcgcaacc cttgatctta gttgccagca
1081 ttcagttggg cactctaagg tgactgccgg tgacaaaccg gaggaaggtg gggatgacgt
1141 caaatcatca tgccccttat gacctgggct acacacgtgc tacaatggac ggtacagagg
1201 gctgcaaacc cgcgaggggg agccaatccc agaaaaccgt tcccagttcg gattgcaggc
1261 tgcaactcgc ctgcatgaag ccggaatcgc tagtaatcgc ggatcagcat gccgcggtga
1321 atacgttccc gggtcttgta cacaccgccc g
//
LOCUS JN787949 1447 bp DNA linear BCT 12-MAY-2014
DEFINITION Haloferax chudinovii strain RS77 from Russia identified-by Roman
Baslerov 16S ribosomal RNA gene, partial sequence.
ACCESSION JN787949
VERSION JN787949.1
KEYWORDS .
SOURCE Haloferax chudinovii
ORGANISM Haloferax chudinovii
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria;
Haloferacales; Haloferacaceae; Haloferax.
REFERENCE 1 (bases 1 to 1447)
AUTHORS Saralov,A.I., Baslerov,R.V. and Kuznetsov,B.B.
TITLE Haloferax chudinovii sp. nov., a halophilic archaeon from Permian
potassium salt deposits
JOURNAL Extremophiles 17 (3), 499-504 (2013)
PUBMED 23525908
REFERENCE 2 (bases 1 to 1447)
AUTHORS Saralov,A.I., Baslerov,R.V. and Kuznetsov,B.B.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2011) Molecular Diagnostics, Centre
Bioengineering RAS, Prospekt 60-letya Oktyabrya, Building 7-1,
Moscow 117312, Russian Federation
FEATURES Location/Qualifiers
source 1..1447
/organism="Haloferax chudinovii"
/mol_type="genomic DNA"
/strain="RS77"
/isolation_source="monolites of mottle silvinite from
Upper Kama salt mine"
/db_xref="taxon:1109010"
/country="Russia: Russian Federation"
/collection_date="20-Jul-2009"
/collected_by="Alexander Saralov"
/identified_by="Roman Baslerov"
rRNA <1..>1447
/product="16S ribosomal RNA"
BASE COUNT 353 a 367 c 455 g 271 t
ORIGIN
1 ttccggttta attcccccgg aggtcattgc tattggggtc cgatttagcc ntgctagttg
61 cacgagttca cactcgtggc gaaaagctca gtaacacgtg gccaaactac cctacagaga
121 acgataacct cgggaaactg aggctaatag ttcatacggg agtcctgctg gaatgccgac
181 tccccgaaac gctcaggcgc tgtaggatgt ggctgcggcc gattaggtag acggtggggt
241 aacggcccac cgtgccgata atcggtacgg gttgtgagag caagaacccg gagacggaat
301 ctgagacaag attccgggcc ctacggggcg cagcaggcgc gaaaccttta cactgcacgc
361 aagtgcgata aggggacccc aagtgcgagg gcatatagtc ctcgcttttc tcgactgtaa
421 ggcggtcgag gaataagagc tgggcaagac cggtgccagc cgccgcggta ataccggcag
481 ctcaagtgat gaccgatatt attgggccta aagcgtccgt agccggccac gaaggttcat
541 cgggaaatcc gccagctcaa ctggcgggcg tccggtgaaa accacgtggc ttgggaccgg
601 aaggctcgag gggtacgtcc ggggtaggag tgaaatcctg taatcctgga cggaccaccg
661 atggcgaaag cacctcgaga agacggatcc gacggtgagg gacgaaagct agggtctcga
721 accggattag atacccgggt agtcctagct gtaaacgatg ctcgctaggt gtggcacagg
781 ctacgagcct gtgctgtgcc gtagggaagc cgagaagcga gccgcctggg aagtacgtcc
841 gcaaggatga aacttaaagg aattggcggg ggagcactac aaccggagga gcctgcggtt
901 taattggact caacgccgga catctcacca gctccgacta cagtgatgac gatcaggttg
961 atgaccttat cacgacgctg tagagaggag gtgcatggcc gccgtcagct cgtaccgtga
1021 ggcgtcctgt taagtcaggc aacgagcgag acccgcactt ctaattgcca gcagcagttt
1081 cgactggctg ggtacattag aaggactgcc gctgctaaag cggaggaagg aacgggcaac
1141 ggtaggtcag tatgccccga atgagctggg ctacacgcgg gctacaatgg tcgagacaat
1201 gggttgctat ctcgaaagag aacgctaatc tcctaaactc gatcgtagtt cggattgagg
1261 gctgaaactc gccctcatga agctggattc ggtagtaatc gcatttcaat agagtgcggt
1321 gaatacgtcc ctgctccttg cacacaccgc ccgtcaaagc acccgagtga ggtccggatg
1381 aggccaccac acggtggtcg aatctgggct tcgcaagggg gcttaagtcg tacaggggta
1441 accgtaa
//
LOCUS JN787950 1447 bp DNA linear BCT 12-MAY-2014
DEFINITION Haloferax chudinovii strain RS79 identified-by Roman Baslerov 16S
ribosomal RNA gene, partial sequence.
ACCESSION JN787950
VERSION JN787950.1
KEYWORDS .
SOURCE Haloferax chudinovii
ORGANISM Haloferax chudinovii
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria;
Haloferacales; Haloferacaceae; Haloferax.
REFERENCE 1 (bases 1 to 1447)
AUTHORS Saralov,A.I., Baslerov,R.V. and Kuznetsov,B.B.
TITLE Haloferax chudinovii sp. nov., a halophilic archaeon from Permian
potassium salt deposits
JOURNAL Extremophiles 17 (3), 499-504 (2013)
PUBMED 23525908
REFERENCE 2 (bases 1 to 1447)
AUTHORS Saralov,A.I., Baslerov,R.V. and Kuznetsov,B.B.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2011) Molecular Diagnostics, Centre
Bioengineering RAS, Prospekt 60-letya Oktyabrya, Building 7-1,
Moscow 117312, Russian Federation
FEATURES Location/Qualifiers
source 1..1447
/organism="Haloferax chudinovii"
/mol_type="genomic DNA"
/strain="RS79"
/isolation_source="monolites of mottle silvinite from
Upper Kama salt mine"
/db_xref="taxon:1109010"
/collection_date="20-Jul-2009"
/collected_by="Alexander Saralov"
/identified_by="Roman Baslerov"
rRNA <1..>1447
/product="16S ribosomal RNA"
BASE COUNT 354 a 368 c 455 g 269 t
ORIGIN
1 cttccggttg aatcccccgg aggtcattgc tattggggtc cgatttagcc ntgctagttg
61 cacgagttca cactcgtggc gaaaagctca gtaacacgtg gccaaactac cctacagaga
121 acgataacct cgggaaactg aggctaatag ttcatacggg agtcctgctg gaatgccgac
181 tccccgaaac gctcaggcgc tgtaggatgt ggctgcggcc gattaggtag acggtggggt
241 aacggcccac cgtgccgata atcggtacgg gttgtgagag caagaacccg gagacggaat
301 ctgagacaag attccgggcc ctacggggcg cagcaggcgc gaaaccttta cactgcacgc
361 aagtgcgata aggggacccc aagtgcgagg gcatatagtc ctcgcttttc tcgactgtaa
421 ggcggtcgag gaataagagc tgggcaagac cggtgccagc cgccgcggta ataccggcag
481 ctcaagtgat gaccgatatt attgggccta aagcgtccgt agccggccac gaaggttcat
541 cgggaaatcc gccagctcaa ctggcgggcg tccggtgaaa accacgtggc ttgggaccgg
601 aaggctcgag gggtacgtcc ggggtaggag tgaaatcctg taatcctgga cggaccaccg
661 atggcgaaag cacctcgaga agacggatcc gacggtgagg gacgaaagct agggtctcga
721 accggattag atacccgggt agtcctagct gtaaacgatg ctcgctaggt gtggcacagg
781 ctacgagcct gtgctgtgcc gtagggaagc cgagaagcga gccgcctggg aagtacgtcc
841 gcaaggatga aacttaaagg aattggcggg ggagcactac aaccggagga gcctgcggtt
901 taattggact caacgccgga catctcacca gctccgacta cagtgatgac gatcaggttg
961 atgaccttat cacgacgctg tagagaggag gtgcatggcc gccgtcagct cgtaccgtga
1021 ggcgtcctgt taagtcaggc aacgagcgag acccgcactt ctaattgcca gcagcagttt
1081 cgactggctg ggtacattag aaggactgcc gctgctaaag cggaggaagg aacgggcaac
1141 ggtaggtcag tatgccccga atgagctggg ctacacgcgg gctacaatgg tcgagacaat
1201 gggttgctat ctcgaaagag aacgctaatc tcctaaactc gatcgtagtt cggattgagg
1261 gctgaaactc gccctcatga agctggattc ggtagtaatc gcatttcaat agagtgcggt
1321 gaatacgtcc ctgctccttg cacacaccgc ccgtcaaagc acccgagtga ggtccggatg
1381 aggccaccac acggtggtcg aatctgggct tcgcaagggg gcttaagtcg tacagggtaa
1441 ccgtaaa
//
LOCUS JN792455 911 bp DNA linear BCT 22-AUG-2013
DEFINITION Weissella cibaria strain 145 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792455
VERSION JN792455.1
KEYWORDS .
SOURCE Weissella cibaria
ORGANISM Weissella cibaria
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Weissella.
REFERENCE 1 (bases 1 to 911)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 911)
AUTHORS Patel,A.R.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..911
/organism="Weissella cibaria"
/mol_type="genomic DNA"
/strain="145"
/isolation_source="cabbage"
/db_xref="taxon:137591"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63f, fwd_seq: agttgatcctggctcag,
rev_name: 1386r, rev_seq: accttgttacgactt"
rRNA <1..>911
/product="16S ribosomal RNA"
BASE COUNT 242 a 193 c 265 g 209 t
ORIGIN
1 tgttgtaaga gaagaatgac attgagagta actgttcaat gtgtgacggt atcttaccag
61 aaaggaacgg ctaaatacgt gccagcagcc gcggtaatac gtatgttcca agcgttatcc
121 ggatttattg ggcgtaaagc gagcgcagac ggttatttaa gtctgaagtg aaagccctca
181 gctcaactga ggaattgctt tggaaactgg atgacttgag tgcagtagag gaaagtggaa
241 ctccatgtgt agcggtgaaa tgcgtagata tatggaagaa caccagtggc gaaggcggct
301 ttctggactg taactgacgt tgaggctcga aagtgtgggt agcaaacagg attagatacc
361 ctggtagtcc acaccgtaaa cgatgagtgc taggtgtttg agggtttccg cccttaagtg
421 ccgcagctaa cgcattaagc actccgcctg gggagtacga ccgcaaggtt gaaactcaaa
481 ggaattgacg gggacccgca caagcggtgg agcatgtggt ttaattcgaa gcaacgcgaa
541 gaaccttacc aggtcttgac atcccttgac aactccagag atggagcgtt cccttcgggg
601 acaaggtgac aggtggtgca tggttgtcgt cagctcgtgt cgtgagatgt tgggttaagt
661 cccgcaacga gcgcaaccct tattactagt tgccagcatt nagttgggca ctctagtgag
721 actgccggtg acaaaccgga ggaaggtggg gatgacgtca aatcatcatg ccccttatga
781 cctgggctac acacgtgcta caatggcgta tacaangagt tgccaacccg cgagggtgag
841 ctaatctctt aaagtacgtc tcagttcgga ttgtaggctg caactcgcct acatgaagtc
901 ggaatcgcta g
//
LOCUS JN792456 1057 bp DNA linear BCT 22-AUG-2013
DEFINITION Weissella cibaria strain 142 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792456
VERSION JN792456.1
KEYWORDS .
SOURCE Weissella cibaria
ORGANISM Weissella cibaria
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Weissella.
REFERENCE 1 (bases 1 to 1057)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 1057)
AUTHORS Patel,A.R., Patel,A.T. and Prajapati,J.B.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..1057
/organism="Weissella cibaria"
/mol_type="genomic DNA"
/strain="142"
/isolation_source="cucumber"
/db_xref="taxon:137591"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63f, fwd_seq:
caggcctaacacatgcaagtc, rev_name: 1389r, rev_seq:
acgggcggtgtgtacaag"
rRNA <1..>1057
/product="16S ribosomal RNA"
BASE COUNT 282 a 229 c 311 g 233 t
ORIGIN
1 caccaagacg atgatgcata gccgagttga gagactgatc ggccanaatg ggactgagac
61 acggcccata ttcctacggg aggcagcagt agggaatctt ccacaatggg cgaaagcctg
121 atggagcaac gccgcgtgtg tgatgaaggg tttcggctcg taaaacactg ttgtaagaga
181 agaatgacat tgagagtaac tgttcaatgt gtgacggtat cttaccagaa aggaacggct
241 aaatacgtgc cagcagccgc ggtaatacgt atgttccaag cgttatccgg atttattggg
301 cgtaaagcga gcgcagacgg ttatttaagt ctgaagtgaa agccctcagc tcaactgagg
361 aattgctttg gaaactggat gacttgagtg cagtagagga aagtggaact ccatgtgtag
421 cggtgaaatg cgtagatata tggaagaaca ccagtggcga aggcggcttt ctggactgta
481 actgacgttg aggctcgaaa gtgtgggtag caaacaggat tagataccct ggtagtccac
541 accgtaaacg atgagtgcta ggtgtttgag ggtttccgcc cttaagtgcc gcagctaacg
601 cattaagcac tccgcctggg gagtacgacc gcaaggttga aactcaaagg aattgacggg
661 gacccgcaca agcggtggag catgtggttt aattcgaagc aacgcgaaga accttaccag
721 gtcttgacat cccttgacaa ctccagagat ggagcgttcc cttcggggac aaggtgacag
781 gtggtgcatg gttgtcgtca gctcgtgtcg tgagatgttg ggttaagtcc cgcaacgagc
841 gcaaccctta ttactagttg ccagcattca gttgggcact ctagtgagac tgccggtgac
901 aaaccggagg aaggtgggga tgacgtcaaa tcatcatgcc ccttatgacc tgggctacac
961 acgtgctaca atggcgtata caacgagttg ccaacccgcg agggtgagct aatctcttaa
1021 agtacgtctc agttnggatt gtaggctgca actcgcc
//
LOCUS JN792457 968 bp DNA linear BCT 22-AUG-2013
DEFINITION Lactobacillus fermentum strain AI3 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792457
VERSION JN792457.1
KEYWORDS .
SOURCE Limosilactobacillus fermentum
ORGANISM Limosilactobacillus fermentum
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Limosilactobacillus.
REFERENCE 1 (bases 1 to 968)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 968)
AUTHORS Patel,A.R., Prajapati,J.B. and Holst,O.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..968
/organism="Limosilactobacillus fermentum"
/mol_type="genomic DNA"
/strain="AI3"
/isolation_source="Dhokla batter"
/db_xref="taxon:1613"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63 f, fwd_seq:
caggcctaacacatgcaagtc, rev_name: 1389 r, rev_seq:
acgggcggtgtgtacaag"
rRNA <1..>968
/product="16S ribosomal RNA"
BASE COUNT 248 a 214 c 287 g 206 t
ORIGIN
1 aacacnncgt gagtgaagna nggnttcggc tcgtaaagct ctgtnnttaa agaagaacac
61 gtatgagagt aactgttcat acgttgacgg tatttaacca gaaagtcacg gctaactacg
121 tgccagcagc cgcggtaata cgtaggtggc aagcgttatc cggatttatt gggcgtaaag
181 agagtgcagg cggttttcta agtctgatgt gaaagcnttc ggcttaaccg gagaagtgca
241 tcggaaactg gataacttga gtgcagaaga gggtagtgga actccatgtg tagcggtgga
301 atgcgtagat atatggaaga acaccagtgg cgaaggcggc tacctggtct gcaactgacg
361 ctgagactcg aaagcatggg tagcgaacag gattagatac cctggtagtc catgccgtaa
421 acgatgagtg ctaggtgttg gagggtttcc gcccttcagt gccggagcta acgcattaag
481 cactccgcct ggggagtacg accgcaaggt tgaaactcaa agganntnnn gggggcccgc
541 acaagcggtg gagcatgtgg tttaattcga agctacgcga agaaccttac caggtcttga
601 catcttgcgc caaccctaga gatagggcgt ttccttcggg aacgcaatga caggtggtgc
661 atggtcgtcg tcagctcgtg tcgtgagatg ttgggttaag tcccgcaacg agcgcaaccc
721 ttgttactag ttgccagcat taagttgggc actctagtga gactgccggt gacaaaccgg
781 aggaaggtgg ggacgacgtc agatcatcat gccccttatg acctgggcta cacacgtgct
841 acaatggacg gtacaacgag tcgcgaactc gcgagggcaa gcaaatctct taaaaccgtt
901 ctcagttcgg actgcaggct gcaactcgcc tgcacgaagt cggaatcgct agtaatcgcg
961 gatcagca
//
LOCUS JN792460 1077 bp DNA linear BCT 22-AUG-2013
DEFINITION Weissella confusa strain AI10 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792460
VERSION JN792460.1
KEYWORDS .
SOURCE Weissella confusa
ORGANISM Weissella confusa
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Weissella.
REFERENCE 1 (bases 1 to 1077)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 1077)
AUTHORS Patel,A.R., Prajapati,J.B. and Holst,O.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..1077
/organism="Weissella confusa"
/mol_type="genomic DNA"
/strain="AI10"
/isolation_source="Idli batter"
/db_xref="taxon:1583"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63 f, fwd_seq:
caggcctaacacatgcaagtc, rev_name: 1389 r, rev_seq:
acgggcggtgtgtacaag"
rRNA <1..>1077
/product="16S ribosomal RNA"
BASE COUNT 286 a 232 c 316 g 239 t
ORIGIN
1 atgatgcata gcngagttga gagactgatc ggccacaatg ngactgagac acggcccata
61 ttcctacggg aggcagcagt agggaatctt ccacaatggg cgaaagcctg atggagcaac
121 gccgcgtgtg tgatgaaggg tttcggctcg taaaacactg ttgtaagaga agaatgacat
181 tgagagtaac tgttcaatgt gtgacggtat cttaccagaa aggaacggct aaatacgtgc
241 cagcagccgc ggtaatacgt atgttccaag cgttatccgg atttattggg cgtaaagcga
301 gcgcagacgg ttatttaagt ctgaagtgaa agccctcagc tcaactgagg aattgctttg
361 gaaactggat gacttgagtg cagtagagga aagtggaact ccatgtgtag cggtgaaatg
421 cgtagatata tggaagaaca ccagtggcga aggcggcttt ctggactgta actgacgttg
481 aggctcgaaa gtgtgggtag caaacaggat tagataccct ggtagtccac accgtaaacg
541 atgagtgcta ggtgtttgag ggtttccgcc cttaagtgcc gcagctaacg cattaagcac
601 tccgcctggg gagtacgacc gcaaggttga aactcaaagg aattgacggg gacccgcaca
661 agcggtggag catgtggttt aattcgaagc aacgcgaaga accttaccag gtcttgacat
721 cccttgacaa ctccagagat ggagcgttcc cttcggggac aaggtgacag gtggtgcatg
781 gttgtcgtca gctcgtgtcg tgagatgttg ggttaagtcc cgcaacgagc gcaaccctta
841 ttactagttg ccagcattca gttgggcact ctagtgagac tgccggtgac aaaccggagg
901 aaggtgggga tgacgtcaaa tcatcatgcc ccttatgacc tgggctacac acgtgctaca
961 atggcgtata caacgagttg ccaacccgcg agggtgagct aatctcttaa agtacgtctc
1021 agttcggatt gtaggctgca actcgcctac atgaagtcgg aatcgctagn natcgcg
//
LOCUS JN792466 1109 bp DNA linear BCT 22-AUG-2013
DEFINITION Weissella cibaria strain 92 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792466
VERSION JN792466.1
KEYWORDS .
SOURCE Weissella cibaria
ORGANISM Weissella cibaria
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Weissella.
REFERENCE 1 (bases 1 to 1109)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 1109)
AUTHORS Patel,A.T., Patel,A.R., Prajapati,J.B. and Holst,O.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..1109
/organism="Weissella cibaria"
/mol_type="genomic DNA"
/strain="92"
/isolation_source="Idli batter"
/db_xref="taxon:137591"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63 f, fwd_seq:
caggcctaacacatgcaagtc, rev_name: 1389 r, rev_seq:
acgggcggtgtgtacaag"
rRNA <1..>1109
/product="16S ribosomal RNA"
BASE COUNT 294 a 230 c 327 g 246 t
ORIGIN
1 ggnncattag ttagttggtg aggtaatggn tcaccaagac gatgatgcat agccgagttg
61 agagactgat cggcnnnaat gggactgaga cacggcccat attnntacgg gaggcagcag
121 tagggaatct tccacaatgg gcgaaagcct gatggagcaa cgccgcgtgt gtgatgaagg
181 gtttcggctc gtaaaacact gttgtaagag aagaatgaca ttgagagtaa ctgttcaatg
241 tgtgacggta tcttaccaga aaggaacggc taaatacgtg ccagcagccg cggtaatacg
301 tatgttccaa gcgttatccg gatttattgg gcgtaaagcg agcgcagacg gttatttaag
361 tctgaagtga aagccctcag ctcaactgag gaattgcttt ggaaactgga tgacttgagt
421 gcagtagagg aaagtggaac tccatgtgta gcggtgaaat gcgtagatat atggaagaac
481 accagtggcg aaggcggctt tctggactgt aactgacgtt gaggctcgaa agtgtgggta
541 gcaaacagga ttagataccc tggtagtcca caccgtaaac gatgagtgct aggtgtttga
601 gggtttccgc ccttaagtgc cgcagctaac gcattaagca ctccgcctgg ggagtacgac
661 cgcaaggttg aaactcaaag gaattgacgg ggacccgcac aagcggtgga gcatgtggtt
721 taattcgaag caacgcgaag aaccttacca ggtcttgaca tcccttgaca actccagaga
781 tggagcgttc ccttcgggga caaggtgaca ggtggtgcat ggttgtcgtc agctcgtgtc
841 gtgagatgtt gggttaagtc ccgcaacgag cgcaaccctt attactagtt gccagcattc
901 agttgggcac tctagtgaga ctgccggtga caaaccggag gaaggtgggg atgacgtcaa
961 atcatcatgc cccttatgac ctgggctaca cacgtgctac aatggcgtat acaangagtt
1021 gccaacccgc gagggtgagc taatctctta aagtacgtct cagttcggat tgtaggctgc
1081 aactcgccna catgaagtcg gaatcgnna
//
LOCUS JN792467 911 bp DNA linear BCT 22-AUG-2013
DEFINITION Weissella cibaria strain AV1 16S ribosomal RNA gene, partial
sequence.
ACCESSION JN792467
VERSION JN792467.1
KEYWORDS .
SOURCE Weissella cibaria
ORGANISM Weissella cibaria
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Weissella.
REFERENCE 1 (bases 1 to 911)
AUTHORS Patel,A., Falck,P., Shah,N., Immerzeel,P., Adlercreutz,P.,
Stalbrand,H., Prajapati,J.B., Holst,O. and Nordberg Karlsson,E.
TITLE Evidence for xylooligosaccharide utilization in Weissella strains
isolated from Indian fermented foods and vegetables
JOURNAL FEMS Microbiol. Lett. 346 (1), 20-28 (2013)
PUBMED 23738850
REFERENCE 2 (bases 1 to 911)
AUTHORS Patel,A.R., Prajapati,J.B. and Holst,O.
TITLE Direct Submission
JOURNAL Submitted (25-SEP-2011) Department of Biotechnology, Ph D Scholar,
Getingevagen, 60, Lund, Skane 22241, Sweden
FEATURES Location/Qualifiers
source 1..911
/organism="Weissella cibaria"
/mol_type="genomic DNA"
/strain="AV1"
/isolation_source="fermented cabbage"
/db_xref="taxon:137591"
/country="India: Gujarat"
/PCR_primers="fwd_name: 63 f, fwd_seq:
caggcctaacacatgcaagtc, rev_name: 1389 r, rev_seq:
acgggcggtgtgtacaag"
rRNA <1..>911
/product="16S ribosomal RNA"
BASE COUNT 242 a 193 c 265 g 209 t
ORIGIN
1 tgttgtaaga gaagaatgac attgagagta actgttcaat gtgtgacggt atcttaccag
61 aaaggaacgg ctaaatacgt gccagcagcc gcggtaatac gtatgttcca agcgttatcc
121 ggatttattg ggcgtaaagc gagcgcagac ggttatttaa gtctgaagtg aaagccctca
181 gctcaactga ggaattgctt tggaaactgg atgacttgag tgcagtagag gaaagtggaa
241 ctccatgtgt agcggtgaaa tgcgtagata tatggaagaa caccagtggc gaaggcggct
301 ttctggactg taactgacgt tgaggctcga aagtgtgggt agcaaacagg attagatacc
361 ctggtagtcc acaccgtaaa cgatgagtgc taggtgtttg agggtttccg cccttaagtg
421 ccgcagctaa cgcattaagc actccgcctg gggagtacga ccgcaaggtt gaaactcaaa
481 ggaattgacg gggacccgca caagcggtgg agcatgtggt ttaattcgaa gcaacgcgaa
541 gaaccttacc aggtcttgac atcccttgac aactccagag atggagcgtt cccttcgggg
601 acaaggtgac aggtggtgca tggttgtcgt cagctcgtgt cgtgagatgt tgggttaagt
661 cccgcaacga gcgcaaccct tattactagt tgccagcatt nagttgggca ctctagtgag
721 actgccggtg acaaaccgga ggaaggtggg gatgacgtca aatcatcatg ccccttatga
781 cctgggctac acacgtgcta caatggcgta tacaangagt tgccaacccg cgagggtgag
841 ctaatctctt aaagtacgtc tcagttcgga ttgtaggctg caactcgcct acatgaagtc
901 ggaatcgcta g
//
LOCUS JN792582 1965 bp mRNA linear INV 22-AUG-2013
DEFINITION Spodoptera litura gamma-aminobutyric receotor alpha2 subunit mRNA,
complete cds.
ACCESSION JN792582
VERSION JN792582.1
KEYWORDS .
SOURCE Spodoptera litura
ORGANISM Spodoptera litura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
Ditrysia; Noctuoidea; Noctuidae; Amphipyrinae; Spodoptera.
REFERENCE 1 (bases 1 to 1965)
AUTHORS Zuo,H., Gao,L., Hu,Z., Liu,H. and Zhong,G.
TITLE Cloning, Expression Analysis, and Molecular Modeling of the
Gamma-Aminobutyric Acid Receptor Alpha2 Subunit Gene from the
Common Cutworm, Spodoptera litura
JOURNAL J. Insect Sci. 13, 49 (2013)
PUBMED 23909412
REFERENCE 2 (bases 1 to 1965)
AUTHORS Zuo,H.L., Gao,L. and Zhong,G.H.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2011) Laboratory of Insect Toxicology, South
China Agricultural University, No. 483, Wushan Road, Tianhe
District, Guangzhou, Guangdong 510642, China
FEATURES Location/Qualifiers
source 1..1965
/organism="Spodoptera litura"
/mol_type="mRNA"
/db_xref="taxon:69820"
/dev_stage="fifth instar larva"
/country="China"
/note="laboratory raised"
CDS 77..1576
/codon_start=1
/product="gamma-aminobutyric receotor alpha2 subunit"
/protein_id="AER59667.1"
/translation="MHTCRPRGVHSIALVLALAIAWLPHADHAAGAGGGGMFGGVNIS
AILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFHFRQFWTDPR
LAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRS
IRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQ
SKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN
RNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYAT
VGYMAKRIQMRKQRFTAVQKMAAEKKMQIDGPPGTSEPLPPPRTSTLTRPPPPSRSSE
VRFKVHDPKAYSKGGTLENTINGSRGPAPAPVPAAPQPDEEAGPPPHLIHASKGINKL
LGTTPSDIDKYSRIVFPVCFVCFNLMYWIVYLHVSDVVADDLVLLGEEN"
BASE COUNT 555 a 467 c 426 g 517 t
ORIGIN
1 cacgggcccg tcggctccct ggtactcgat tggcagacca cacggtaccg gaagctcgca
61 cgcggacctg caaaacatgc atacgtgccg tccgcgcggc gtgcacagca tcgcgcttgt
121 gctggctctc gccatcgcct ggttgcctca tgctgaccat gccgcgggag cgggcggagg
181 tggtatgttt ggtggcgtca atatctcagc cattttggat tcgctaagtg taagctacga
241 taaaagagtg aggccgaact atggaggacc gcccgtggat gtgggagtca ccatgtacgt
301 gctctccatc agctccttat ctgaagtgaa aatggatttc accctggatt tccacttcag
361 acagttttgg acagacccca ggcttgctta caaaaaaagg acgggtgtgg agacactttc
421 cgtcggctca gaatttatta gaaacatatg ggtacccgac actttctttg ttaacgaaaa
481 acagtcttat ttccacattg ctactacaag caacgaattc atccgcattc atcattctgg
541 atctattact aggagtataa gactgactat caccgcttct tgtccaatgg atctgcaata
601 ctttccgatg gaccgtcaat tatgcaatat tgaaatcgaa agtttcggct acaccatgcg
661 ggacatccga tacaagtgga acgaggggcc caactctgtg ggcgtgtcga gcgaagtgtc
721 tctgccgcaa tccaaggtgc tgggccatcg gcagcgagcc atggagatct ctcttacgac
781 aggaaactat tcacgactgg catgcgagat tcaatttgtc cgttcaatgg gatactactt
841 aatccaaata tacattccat ctggcctaat tgtaattata tcttgggtat cattctggtt
901 gaaccgaaat gcgacacctg ctagggtatc actaggtgtt accactgtac ttacgatgac
961 tacgcttatg tcatccacga atgccgcact gcccaagatc tcatatgtca agtctatcga
1021 tgtctacttg ggaacctgct tcgtcatggt cttcgccagt cttctagaat atgctaccgt
1081 cggctatatg gctaaaagga tacagatgag gaaacaaaga tttactgctg ttcagaaaat
1141 ggctgctgaa aagaaaatgc aaatagacgg gccaccaggt acatcggagc ctttaccacc
1201 accgaggacg agtacgctaa cgagaccacc accaccgagt agatcttcag aggtccgatt
1261 caaagttcat gacccgaaag catattccaa gggcggcacc ttagaaaaca ctatcaatgg
1321 atctcgaggt cccgctccgg cacctgtacc tgctgccccg cagcctgatg aagaagctgg
1381 accacccccg caccttattc atgcttcgaa gggtatcaac aaactgctcg gaacgacacc
1441 atcggacatc gacaagtact ctcgcatcgt gttccccgtc tgcttcgttt gctttaactt
1501 aatgtactgg atcgtatacc tccatgtttc cgacgttgtg gccgacgact tggtactact
1561 aggcgaagaa aactaatttc tctcgaataa actatactta ccggacttgt tcaaacttag
1621 ggtgctcatg atcaaccatc catcaagttt cggtaatgcg ctttggaatc ctagaaacgc
1681 tcgataatct attagcgttc tgtaatctta taaatataac aaataaacat cactatgatt
1741 ataatagata cgtgtcgcgt atattgacac tggtaatatt gaattcttta gaaaatagag
1801 ataatataaa gttcaaaata taagtcaatc tgtctaagag acaaaatgtt atatcttcaa
1861 cagttatcag tcttaaataa atgtgtatgt atacatgaaa atccgcagtt ataaagtaat
1921 atacatttta tgggattaaa ttagttttta ataagaaaaa aaaaa
//