LOCUS HO649544 425 bp mRNA linear EST 20-JAN-2012
DEFINITION penium_71836_c45085_c Penium margaritaceum EST library Penium
margaritaceum cDNA 5', mRNA sequence.
ACCESSION HO649544
VERSION HO649544.1
DBLINK BioSample: SAMN00169693
KEYWORDS EST.
SOURCE Penium margaritaceum
ORGANISM Penium margaritaceum
Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE 1 (bases 1 to 425)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..425
/organism="Penium margaritaceum"
/mol_type="mRNA"
/strain="SKD-2004, CL-18"
/db_xref="taxon:102169"
/clone_lib="SAMN00169693 Penium margaritaceum EST library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 97 a 121 c 103 g 104 t
ORIGIN
1 gagactggca atggtatcat cgtgcttgct gagggccgcc tgatgaacct cggctgcgcc
61 actggccacc ccagctttgt catgtcgtgc tcgttcacca accaggtcat tgctcagctc
121 gagctgtgga acgagaggtc ctcggccaag tacgacaagc aggtgtatgt gctgcccaag
181 cacctggatg agaaggtggc tgcacttcac ttgcccaagc tgggtgccat cttgacaaag
241 ctctctccct cgcaggcgga gtacatcaat gtgcctgtgg agggccccta caagcccgct
301 cactacaggt attagacaga aagtgctcat cattctgttc tacagtagca cgtgctatta
361 ctgaactgac cgtttttttc ccttcatatc acaaatagtg atcatattcc aaaaagattc
421 accct
//