LOCUS HO502895 1062 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c11251_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO502895
VERSION HO502895.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 1062)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1062
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 279 a 217 c 295 g 264 t
ORIGIN
1 cttcgacact gacgttgaca gatctgamtk ccskkgattc aactggtcrg gagttgaatc
61 gaaaccgttt gattgcactc atggccgcca ttgtgctgga agagcaccca ggaacaacca
121 ttgtgacaga cagcgtcacg tcagatggac tcacagactt cattgagaag aaacttggcg
181 gacgacatca tcgatttaaa cgagggtaca aaaatgtcat taatgaaggc attaggctga
241 actcccttgg acaagaagtg catcttgcaa ttgagacgag cggccatggt gcgatgcagg
301 aaaaccactg gcttgatgac ggcgcctatc taatggtcaa actcctcatc aagctcgcca
361 agaatgcagg atcagggtcg ggatcggggt cttctgacag aactgcagca ctgacaagaa
421 tgattgaggg tctcgaagag gctgttgtag ccacagaggt tcgcttcaaa aatcaatcag
481 gatagcaagg agcttagtgg aggggatttc aaagaatacg gttcacggat actggcagag
541 ctggaggttt tggcggaatc gtcagccgat cttgttgtgg ctaagcccaa cttcgagggg
601 gtcagagttt ctggattcgg gggttggttc ttactccgac tgtcgctgca cgaccctgta
661 ctccctttga acattgaggc cccgagtttt gaggcggcag cgaagctggg ctattttgtc
721 agagatgtcg tcagaaagtt ccccgctgtg gatgtctccg cgttggaaaa ttttctggct
781 gcgtcagttt ccacttcaca ttaatcgacg atctgatcga tcagtgctct ctttgcaaag
841 ctgcgattgt tgcagagcct gttccaatcg gttttgtgga agctcggaac tttttcctat
901 tatgaagaag ggggggagaa ggagggaaaa agatcttcgg gcaaaggaat gaaggcaatg
961 aagaggtttc cagtctgagt tcttaagtca gggacttgaa tctttgtact gatggtggca
1021 gtgttagcaa tcgaagtgac aaatgtttaa ttwaaaaaaa aa
//