LOCUS HO486765 1210 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c29967_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO486765
VERSION HO486765.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 1210)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1210
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 321 a 223 c 325 g 331 t
ORIGIN
1 cgggatgagg agtgaagggc aaagcttaca cgtactactg tagggccatc gtgttgctat
61 tacaattcgt tcagagaggg ccagcgttgc ttcggctctt acgatatatg atagctcagg
121 cgtcttcaaa tgtaacaccc gcggttctat gcgggggaag agcttgggct cacgtcgacg
181 tcgtcgtgta cactttcata tagcaattag tacataacca gccaaagctc aatcgggatc
241 cacgatcgtt ttttttacag aacgtcataa ttatgatcga tgctatattg atgccgatgg
301 gtgagaagag cagagaagag caagcagggc aggggaaatg taagggaagg tggatgacct
361 tgcgggaacg tggctcactc acggtcacgg gtttacgaag tgatagatag aggccacgaa
421 cgaccatagc cgcggtgagt gggggggaga gtgcagtacg aggccgaagc aaggagcggg
481 gggcaaaagg tcaagctgcg gaagagacgt tcttttgggt ttggaaattc aaattgttat
541 taatttttta cgtttttaca gtctgttact tgttaacgag tgagcgaatt gattaaaata
601 aaactattcg ttctcacggt agtagtggct cgtaccttga tcgcgcgatt tcaagttcgg
661 tggggtcttc aaaactggcr atycsmkrsa aggaaatcca acgatggaca attaaacttt
721 gggtttcgaa attcaactta ttatttctaa attatgcttc ctcattttgt tagctgtaac
781 gagtgagtgg attgacctaa tttttttcgt tgctctgtct gcagtagtgg gtggcgaatt
841 caagttagct gccagggcag tacaagcgca ctagagccag gtttattcga atttcgtgta
901 cataccacat cctacatata gacgaaatgg gatgttgtat agcagctgtg tgattatgtt
961 atgtaaggag aaattagagc agtttaatga gattactgtg agagactaca gtagtaagct
1021 tggcttagaa tcttggggcc ccccgtaacg agagatttat kragcctatg gatgagggcc
1081 tcctaatgct ccctcgctgt cattctttca cgttactcga gctgtgtggt agnttccgag
1141 accatacgta actttgggag gtggtgcatt caagaacaag tactcagaga attcaatcaa
1201 cgatcatggc
//