LOCUS HO468916 397 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c32177_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO468916
VERSION HO468916.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 397)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..397
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 116 a 86 c 101 g 94 t
ORIGIN
1 gctcagcttg tgaatgtgtt ggcagcatct taatttgaga gctcaagcat cagggatgaa
61 acaagttgag ttgtctgtgc gagcatacga agcacagcct ccaatggaac agatgcaacg
121 caagtaatgg atcccctagg ccagcagagc agcctttgat agactctcaa gagttgtatg
181 aagcgttgac aagcagagca agtactgggt ttggaaggat tgagttgtgt tcacaagttg
241 gtattgcatg atcgcatgag agcagaaacc tttgaacaaa gcattatcag acgtcccata
301 ggcaagctac agtaggtctc attggctgag ccccttatga acgtaccccc atataggcag
361 gccagaatag ggcagctctt atatcccctt ccaaaat
//