LOCUS HO454151 1089 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c11991_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO454151
VERSION HO454151.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 1089)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1089
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 219 a 268 c 333 g 269 t
ORIGIN
1 cttttagcag gggccaaaat accatcttcc gaaactgtcc tggtccgatg tgcaatcatt
61 gcgctcttgt caggctacgg gcttcagaaa cagaagcacc ccctgttagg ctcaccaggg
121 gttcgacacc tggtcctagc aagggcgatc attggcttct tcgcactgtc cgcgttcttt
181 tatagtatac aggcccttcc gctgcgcgac gccacggtgc ttaatttcac gatgcccgta
241 atgacggcca tgatggctgc ggtctttctg ggggaggctt gggggagcag ggaggtagcg
301 ggtacgatat gcagcctggt gggagtactg ctggtgacgc agccagacat tctgtttggg
361 aaaccgaaac tcttacaagg tgcgaacgaa cggaagggca gcgaggagac gctgggggtg
421 tttatggcga tcggggggtc tgctttgggg gcagcctcgt acatcgtctt gagagtcgta
481 gggaagaccg gagaaccccc gctagtatgc gtctttgcgt ttgcggcctt ctccgccccg
541 atggcagccg tgggtatgct tttccagccc ttcgcggtac cttctgcttg ggagtggttc
601 gagttggtag tcgtgggcct cagcgctttc gctgcacagg ttctgctgaa ccggggcctg
661 caactagaaa aggcgtccaa agcgacggcg atacagtacg tcaagatcct ggtgacgtac
721 ttgttcggcg tcatcttcct ccacgaggta ccgtcctttt taggtgtcgt cggcgcttgc
781 ctcatcgcgg cgagcgctgc cttcgtaact ctcggcgcag ggcattagct cggggtatct
841 tattgaaaaa cgtgaaaatc cggggattgg tgggaagtag cgacgagaga agttgttact
901 tttggacttc actgcacgca aagtcttgct ttgggaggta cactgctttt gtaagataga
961 ttgagttccg ttggacaagc ttgctggaat agtgagagag ccacagacat caggtaatta
1021 agtcgatgaa tgtgcaagac atacagctcc aaacctgcca gtgggtttca cgtgctccga
1081 gcatgattc
//