LOCUS HO443955 513 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c33841_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO443955
VERSION HO443955.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 513)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..513
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 96 a 130 c 146 g 141 t
ORIGIN
1 cacgcttgtt agttcgttcg ttttattggg ttgttggtat caaagtaatt gtacaaacat
61 gcttcctgca tggagcccga agtgtcccct agcctcgtcg acaaaagtct tggtttgggt
121 gggtttactc tgaaggcatc gtcttgatga tgtcagaatc accagggtcc gtgatgctca
181 acgtgcctac ccggaagtac tttccgcacg ccgtcccaag gtcaacgttg tttccgctgt
241 agtggtgcac gccggtcttt gaaagcatgg catagtactc gatctcggac tttcggaggg
301 ggggagtgtt gttggagatg atcaccagct tggctttacc gccccgcagc gacttgagca
361 cggtcttgta cccaagggtg tacttgccac tcttcattac cagggcgagc ctgttgttga
421 tgctctcctg ggccttcttg gtcttcttga cgggcggcat cttgacgaga ggccctagcc
481 agaagcgccc gcacaaggtg ctgttcagag aag
//