LOCUS HO379656 428 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c44914_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO379656
VERSION HO379656.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 428)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..428
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 93 a 133 c 105 g 97 t
ORIGIN
1 cgtccacgcc cagagcatca tcgccatctt gatcacccag gtcatcatca tgggcgcagt
61 tgagggctac cgtgtgtctg gtgagagccc agttctcaac ggtgctaccg gtgacaacct
121 gtaccccggt ggcagcttcg accccctggg tctggctgac gaccccgaca cattcgctga
181 gctgaaggtg aaggagatca agaacggacg tcttgctatg ttctcctggt tcggatatgc
241 cgtccaggcc attgtcaccg gcaagggccc cctcgagtcc ctgagcgacc acttggctga
301 ccccaccgcc aacaacgcct gggcctatgc ccagaacttc gtcccaggcg tttaagtgcg
361 tcctgcaatt agaatcctgt ttgtacacta cttgtgaata atctcataaa attaactcat
421 ctacaaat
//