LOCUS HO367694 484 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c33769_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO367694
VERSION HO367694.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 484)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..484
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 115 a 109 c 126 g 134 t
ORIGIN
1 ccacatcatg gtggtgatac tttaggattg cgcgtatttg gagactgtgg agctcctcgg
61 tacaggcctc gccggtccca tcggatctct gaggctaaaa aactgcccta acctgcggag
121 gatagtagga tcgccgcata tcactcaatt tgaaaattga aggaggatgt tatgagctgc
181 aatgcgccat caaattcgca gatgactggt ttccgcaaca cgtcatgtgt gcctcttgtg
241 tggatgtcgg tttggtgcaa cctctagggt caacgaacgg acacatggtt tagagtttag
301 ggcttaggtg caaatgccgg tttggtgcaa catcacaatt ggcacatggt tgtccaagaa
361 agtactagct tgtcgtctta ggttagtgtg gtctctacca agtaactcca gttagagcta
421 ctcaagcagc tatgtcccaa tgccttacct tgttggccct ctggattaag tgtcatcatg
481 caat
//