LOCUS HO357061 312 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c36050_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO357061
VERSION HO357061.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 312)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..312
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 77 a 58 c 89 g 87 t
ORIGIN
1 tgtacaacca tcgtgttgcc aacgcttgga agtggggttg tgtaatgagc gttgtccaca
61 acacatatgg agtcgaggtg gaggcacagg agaggggcaa gggtatgctc cctgcagcgg
121 ctgctgtgag gtgaagcggt gtttgtacaa agttgttgag gtacttttgt atggtttggg
181 taaaggtgtr cattatcaat aaacaatatc gggggatcac atagactcac atctacatat
241 ttatttttag cttcgagacc tatacatatg tgcaccatta ggggccggtc ccctgtaaga
301 atcaccttct gg
//