LOCUS HO350494 492 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c30561_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO350494
VERSION HO350494.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 492)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..492
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 130 a 125 c 132 g 104 t
ORIGIN
1 aggtaggcaa gatgcagatc tttgtcaaga ccctgacggg caagaccatc accttggagg
61 tggagagcag tgatactatc gacaatgtga aggcaaagat tcaggataag gaaggtatcc
121 ctccggtcca gcagcggctc atctttgcgg gcaagcagtt ggaggatggc cgtactcttg
181 ccgactacaa catccagaaa gagtctaccc tgcaccttgt gcttcggctt cggggtggta
241 tcatcgagcc gtcgctcatg gcacttgcta ggaagtacaa cgccgagaag atgatttgcc
301 ggaagtgcta tgctcgcctg caccctcgtg ctaccaactg cagaaagaag aagtgtggtc
361 accagcaacc rgctgcggcc aaagaagaag atcaagtaga tgctcctcct tcaagcgcat
421 ataacccagc tagttgccta tagatgggag ttgtaccctt catatgtaaa agctgacctg
481 cgccaagcat ct
//