LOCUS       HM769330                1830 bp    DNA     linear   BCT 10-DEC-2010
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            07-03250 OafA (oafA) pseudogene, complete sequence.
ACCESSION   HM769330
VERSION     HM769330.1
KEYWORDS    .
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Hauser,E., Junker,E., Helmuth,R. and Malorny,B.
  TITLE     Different mutations in the oafA gene lead to loss of O5-antigen
            expression in Salmonella enterica serovar Typhimurium
  JOURNAL   J. Appl. Microbiol. 110 (1), 248-253 (2011)
   PUBMED   20961365
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Hauser,E., Junker,E., Helmuth,R. and Malorny,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2010) National Salmonella Reference Laboratory,
            Federal Institute for Risk Assessment, Thielallee 88-92, Berlin
            14195, Germany
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="07-03250"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
     gene            1..1830
                     /gene="oafA"
                     /note="OafA"
                     /pseudo
     variation       1793
                     /gene="oafA"
                     /note="compared to NC_003197.1"
                     /replace="g"
BASE COUNT          532 a          332 c          371 g          595 t
ORIGIN      
        1 atgatctaca agaaattcag actcgatata aatgggctaa gagcttttgc attgataagt
       61 gttgtgctgt atcacttcgg tgtaccttat gtgtcaggtg gctttatagg tgtagatgtt
      121 ttctttgtaa tttctggttt tcttatgact ggaattgtcc ttgaacgcgt agaccacaaa
      181 ggagtacttg atttttatat tgcaagattc ctaagaattg taccagctct ggtatttgca
      241 attctcttgt tgatgatttt cggtttattt acactaagta caaatgaata cgaagcactt
      301 agcaagaacg caatatcgtc tttacttttt tattcaaata attattacgc aattcactct
      361 agttatttcg actcatcatc agagttcaac tttttgcttc acacctggtc actatcagtt
      421 gagtggcaat tttatatttt atatccttta ttagtcatta tagttaaaaa attacggttt
      481 cctgttggac tctcattatc tgtaatttta gccatgtcac ttgcaattac acttatgcga
      541 gtgactggaa ccaaagaaga tattttctat cttatcccta ccagggcatg ggaaatgctg
      601 gctggcggcc ttgtatacat agcatctgta cgttacaaaa tgccagaatg gataaagcat
      661 tgtgaggttt atgggatagt cctcattgtt gttgctgttg ttatactgca cagtaatggt
      721 tactggccaa gctattcagc actcgctccc gtgctgggtg cttcgatggt tattctggct
      781 aacaaacaga actctttatt cacatcaaac agaattgcac agtgggtggg taagatttct
      841 tactcagttt atttatggca ctggcctgta attgtagcga tgaaacatta tgatattgag
      901 ttcagcgcta taaatatttt ctttggtgta attgtgtctt ttgcgcttgg ggatatttca
      961 tacagaacaa ttgaaaacac gctcaggaaa cgagttaagc tacaatttaa tattgtatta
     1021 ttttcctcta ctctggctct atgcttgttt gtcatgttca caaaaggtgt tagttttaga
     1081 ttttcagaca ccctaaagca agtcgttgag tatcgtatgg acaactctcc ctggaggcct
     1141 gatatttgct tcctcaatcc agatcaagat tattcagcat tctcaaaatg tcaggataaa
     1201 atgactgaaa agtcttttgt tgtatggggt gactcgcatg ccgcacatct tatgccaggg
     1261 ctgaaatcgg tatttggaaa ttcacttaac attacgcaga gaactgcaag cttgtgccca
     1321 ccaatcattg ggcttcaaaa agatgacagg ccgtattgca aagacatcaa tgatatggta
     1381 gccaaggaaa tttcagacaa caagcctact acggtattaa tgtccgcgtt gtggcctgtc
     1441 tatcctatgc gtgattatct gcctgagact attaaattcc tgaaggataa caaagtaaaa
     1501 aacatcatca ttgttggccc gttcccggtt tggaagaaaa cgatgattga tactattgag
     1561 gatatgggga ttaattccgg aaggaccgtt ccatggagca tgacggatga aacccgtaat
     1621 ctgagagata atgacaaata tcttagagag ctggcgaaag agcattccct tacttatatt
     1681 tcaccacttg agactatgtg tacagaaagt tattgcaaag caataatagg gaatagaatt
     1741 gcttacccta tacaatatga caatgcgcac ctaacaccag aaggctcagg gtagtttatt
     1801 gaggaagtga aaaagcagat ttcaaaataa
//