LOCUS HM769323 1823 bp DNA linear BCT 10-DEC-2010
DEFINITION Salmonella enterica subsp. enterica serovar 4,12:i:- strain
06-05089 OafA (oafA) pseudogene, complete sequence.
ACCESSION HM769323
VERSION HM769323.1
KEYWORDS .
SOURCE Salmonella enterica subsp. enterica serovar 4,12:i:-
ORGANISM Salmonella enterica subsp. enterica serovar 4,12:i:-
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Salmonella.
REFERENCE 1 (bases 1 to 1823)
AUTHORS Hauser,E., Junker,E., Helmuth,R. and Malorny,B.
TITLE Different mutations in the oafA gene lead to loss of O5-antigen
expression in Salmonella enterica serovar Typhimurium
JOURNAL J. Appl. Microbiol. 110 (1), 248-253 (2011)
PUBMED 20961365
REFERENCE 2 (bases 1 to 1823)
AUTHORS Hauser,E., Junker,E., Helmuth,R. and Malorny,B.
TITLE Direct Submission
JOURNAL Submitted (14-JUL-2010) National Salmonella Reference Laboratory,
Federal Institute for Risk Assessment, Thielallee 88-92, Berlin
14195, Germany
FEATURES Location/Qualifiers
source 1..1823
/organism="Salmonella enterica subsp. enterica serovar
4,12:i:-"
/mol_type="genomic DNA"
/strain="06-05089"
/serovar="4,12:i:-"
/sub_species="enterica"
/db_xref="taxon:353569"
gene 1..1823
/gene="oafA"
/note="OafA"
/pseudo
variation 437^438
/gene="oafA"
/note="compared to NC_003197.1"
/replace="tttatat"
BASE COUNT 529 a 332 c 372 g 590 t
ORIGIN
1 atgatctaca agaaattcag actcgatata aatgggctaa gagcttttgc attgataagt
61 gttgtgctgt atcacttcgg tgtaccttat gtgtcaggtg gctttatagg tgtagatgtt
121 ttctttgtaa tttctggttt tcttatgact ggaattgtcc ttgaacgcgt agaccacaaa
181 ggagtacttg atttttatat tgcaagattc ctaagaattg taccagctct ggtatttgca
241 attctcttgt tgatgatttt cggtttattt acactaagta caaatgaata cgaagcactt
301 agcaagaacg caatatcgtc tttacttttt tattcaaata attattacgc aattcactct
361 agttatttcg actcatcatc agagttcaac tttttgcttc acacctggtc actatcagtt
421 gagtggcaat tttatatcct ttattagtca ttatagttaa aaaattacgg tttcctgttg
481 gactctcatt atctgtaatt ttagccatgt cacttgcaat tacacttatg cgagtgactg
541 gaaccaaaga agatattttc tatcttatcc ctaccagggc atgggaaatg ctggctggcg
601 gccttgtata catagcatct gtacgttaca aaatgccaga atggataaag cattgtgagg
661 tttatgggat agtcctcatt gttgttgctg ttgttatact gcacagtaat ggttactggc
721 caagctattc agcactcgct cccgtgctgg gtgcttcgat ggttattctg gctaacaaac
781 agaactcttt attcacatca aacagaattg cacagtgggt gggtaagatt tcttactcag
841 tttatttatg gcactggcct gtaattgtag cgatgaaaca ttatgatatt gagttcagcg
901 ctataaatat tttctttggt gtaattgtgt cttttgcgct tggggatatt tcatacagaa
961 caattgaaaa cacgctcagg aaacgagtta agctacaatt taatattgta ttattttcct
1021 ctactctggc tctatgcttg tttgtcatgt tcacaaaagg tgttagtttt agattttcag
1081 acaccctaaa gcaagtcgtt gagtatcgta tggacaactc tccctggagg cctgatattt
1141 gcttcctcaa tccagatcaa gattattcag cattctcaaa atgtcaggat aaaatgactg
1201 aaaagtcttt tgttgtatgg ggtgactcgc atgccgcaca tcttatgcca gggctgaaat
1261 cggtatttgg aaattcactt aacattacgc agagaactgc aagcttgtgc ccaccaatca
1321 ttgggcttca aaaagatgac aggccgtatt gcaaagacat caatgatatg gtagccaagg
1381 aaatttcaga caacaagcct actacggtat taatgtccgc gttgtggcct gtctatccta
1441 tgcgtgatta tctgcctgag actattaaat tcctgaagga taacaaagta aaaaacatca
1501 tcattgttgg cccgttcccg gtttggaaga aaacgatgat tgatactatt gaggatatgg
1561 ggattaattc cggaaggacc gttccatgga gcatgacgga tgaaacccgt aatctgagag
1621 ataatgacaa atatcttaga gagctggcga aagagcattc ccttacttat atttcaccac
1681 ttgagactat gtgtacagaa agttattgca aagcaataat agggaataga attgcttacc
1741 ctatacaata tgacaatgcg cacctaacac cagaaggctc agggtggttt attgaggaag
1801 tgaaaaagca gatttcaaaa taa
//