LOCUS       HG783942                 368 bp    RNA     linear   BCT 02-JUN-2016
DEFINITION  TPA: Nocardia farcinica IFM 10152 transfer-messenger mRNA
            Nocar_farci_IFM101, single chain mature transcript.
ACCESSION   HG783942
VERSION     HG783942.1
DBLINK      BioProject:PRJEB4570
KEYWORDS    RNAcentral; Third Party Data; TPA; TPA:specialist_db.
SOURCE      Nocardia farcinica IFM 10152
  ORGANISM  Nocardia farcinica IFM 10152
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   
  CONSRTM   The tmRNA Website and RNAcentral
  JOURNAL   Submitted (20-NOV-2013) to the INSDC.
REFERENCE   3
  AUTHORS   Gueneau de Novoa P., Williams K.P.
  TITLE     The tmRNA website: reductive evolution of tmRNA in plastids and
            other endosymbionts
  JOURNAL   Nucleic Acids Res. 32(Database issue), D104-D108(2004).
   PUBMED   14681369
COMMENT     Specialist DB   : The tmRNA Website
            URL             : http://bioinformatics.sandia.gov/tmrna
PRIMARY     TPA_SPAN            PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-365               AP006618.1         4642343-4642707     c
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Nocardia farcinica IFM 10152"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:247156"
     tmRNA           1..368
                     /gene="tmRNA Nocar_farci_IFM101"
                     /product="transfer-messenger mRNA Nocar_farci_IFM101"
                     /note="Tag:(A)ADSHQREYALAA*"
                     /note="Type:single chain mature transcript"
                     /note="Parent Gene Accession:HG522081"
                     /note="ECO:0000305"
                     /note="SO:0000584"
                     /note="GO:0070929"
                     /tag_peptide=95..133
     CDS             <95..133
                     /transl_table=11
                     /gene="tmRNA Nocar_farci_IFM101"
                     /product="proteolysis tag peptide encoded by tmRNA
                     Nocar_farci_IFM101"
                     /note="first codon is 'resume', not start"
                     /db_xref="UniProtKB/TrEMBL:V6C0I0"
                     /protein_id="CDK05634.1"
                     /translation="ADSHQREYALAA"
BASE COUNT           75 a          113 c          119 g           61 t
ORIGIN      
        1 ggggctgaac ggtttcgact gcgtacgttg attcagggga agcgtgtcgg tgcaggcaag
       61 agaccaccgt aagcgtcgct gcaaccaatt aagcgccgat tctcatcagc gcgagtacgc
      121 tctcgctgcc taagcgaagc gtctctgtcg gcccgggata tgccctcggt cccggtgccg
      181 gcatcagcta gagggctcac cgtccgcctc ggtcgcggag acggacggga catccaacag
      241 cgactgggat cgtcatctcg gcttgttcgc gtgaccgaga gatccgagca gagacacagc
      301 gaactgcaca cggagaagcc ctgaagacgc ggcggaggac ccgggttcga ttcccggcag
      361 ctccacca
//