LOCUS GO934571 863 bp mRNA linear EST 06-JAN-2010
DEFINITION 248-A_C02 non normalized cDNA library of 14d regenerating newt
heart Notophthalmus viridescens cDNA 5' similar to
blastnEST_2e-084_CN038732.1--> nm_29_d10_t3_ Math Ambystoma
mexicanum cDNA, mRNA sequence.|blastnNR_e-119_X71951.1-->PWHSP70MR
Pleurodeles waltl mRNA for HSP70|blastxNR_5e-050_CAA54423.1-->mul.
ACCESSION GO934571
VERSION GO934571.1
DBLINK BioSample: SAMN00167664
KEYWORDS EST.
SOURCE Notophthalmus viridescens (eastern newt)
ORGANISM Notophthalmus viridescens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Caudata; Salamandroidea; Salamandridae;
Pleurodelinae; Notophthalmus.
REFERENCE 1 (bases 1 to 863)
AUTHORS Borchardt,T., Looso,M., Bruckskotten,M., Weis,P., Kruse,J. and
Braun,T.
TITLE Analysis of newly established EST databases reveals similarities
between heart regeneration in newt and fish
JOURNAL BMC Genomics 11 (1), 4 (2010)
PUBMED 20047682
COMMENT Contact: Borchardt T
Department of Cardiac Development and Remodelling
Max-Planck-Institute for Heart and Lung Research
Parkstrasse 1, 61231 Bad Nauheim, Germany
Tel: 00496032705269
Email: thilo.borchardt@mpi-bn.mpg.de
Seq primer: M13 Forward.
FEATURES Location/Qualifiers
source 1..863
/organism="Notophthalmus viridescens"
/mol_type="mRNA"
/db_xref="taxon:8316"
/tissue_type="regenerating heart tissue"
/clone_lib="SAMN00167664 non normalized cDNA library of
14d regenerating newt heart"
/dev_stage="adult"
/note="Organ: heart; Vector: pDNR-LIB; Site_1: SFI1A;
Site_2: SFI1B; cDNA from regenerating newt heart tissue,
14 days after ventricular damage"
BASE COUNT 236 a 217 c 218 g 192 t
ORIGIN
1 ggccattacg gccgggcatt tcattgagga gttcaagaga aagcacaaga aggacatcag
61 ccagaacaag agggcagtcc ggaggctgag tactgcttgc gagcgagcca agagaaccct
121 atcttccagc actcaggcca gcatcgagat tgactccctg ttcgaaggca ttgatttcta
181 cacttccatc accagagctc gctttgagga gctgtgtgct gacctcttta gaggaaccct
241 tgagcccgtg gagaacgcct tgagagatgc acagctggac aaagctcaga tccatgacat
301 tgtgcttgta tgaggatcaa cccgcatacc caagatccag aactgctgca cgacttttca
361 atagcagaga actgatcaga aatattaacc cagacgaagc tgtggcctat ggtgcagctg
421 ttcaagctgc tatactgatg ggtgacagtc tgaaatgtgc agacctgctc ctctgatgta
481 gcacctctct cactgtgctg agaccgcagt gtgtgatgac tgtcctcatc aacgcactca
541 ccatcctacc agcaaccaga tctctcacgt actcgataca gctgtgtctg atcagtgtat
601 gagtgaagag catgacacga cacatctctg tacttgatct agtggatcac gccacgtgtg
661 tgcacagatg agtgaccttg acatcgatgc atgtatctga tgtctctgct gtgacagagc
721 tcagcaacag acagatcacg atcacatgac agtcgctgac agagaatgaa gatgtgcaga
781 gctgaagtca gcaatgatga gcagaggagt ctgcagacgc actgatctac gctcactgaa
841 gcatgagatg acagtagctg atc
//