LOCUS       GH664935                 735 bp    mRNA    linear   EST 19-MAY-2010
DEFINITION  CBZA38365.g1 CBZA: Normalized channel catfish cDNA library from
            stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 2,
            AUL_M) Ictalurus punctatus cDNA 3' similar to zebrafish RefSeq,
            XP_001919123.1, PREDICTED: similar to Small EDRK-rich factor 2
            (4F5rel) (h4F5rel) (Gastric cancer-related protein VRG107) [Danio
            rerio], mRNA sequence.
ACCESSION   GH664935
VERSION     GH664935.1
DBLINK      BioSample: SAMN00164693
KEYWORDS    EST.
SOURCE      Ictalurus punctatus (channel catfish)
  ORGANISM  Ictalurus punctatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
            Ictaluridae; Ictalurus.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E.,
            Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L.,
            Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M.,
            Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P.,
            Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B.,
            Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L.,
            Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J.,
            Rokhsar,D. and Liu,Z.
  TITLE     Assembly of 500,000 inter-specific catfish expressed sequence tags
            and large scale gene-associated marker development for whole genome
            association studies
  JOURNAL   Genome Biol. 11 (1), R8 (2010)
   PUBMED   20096101
COMMENT     Contact: Liu ZJ
            The Fish Molecular Genetics and Biotechnology Laboratory,
            Department of Fisheries and Allied Aquacultures and Program of Cell
            and Molecular Biosciences
            Auburn University
            203 Swingle Hall, Auburn University, Auburn, AL 36849, USA
            Tel: 334 844 4054
            Fax: 334 844 9208
            Email: zliu@acesag.auburn.edu
            cDNA library sequencing: DOE Joint Genome Institute
            (http://www.jgi.doe.gov)
            Seq primer: M13 Reverse.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Ictalurus punctatus"
                     /mol_type="mRNA"
                     /db_xref="taxon:7998"
                     /clone_lib="SAMN00164693 CBZA: Normalized channel catfish
                     cDNA library from stomach, muscle, olfactory tissue and
                     trunk kidney (mixed tissue 2, AUL_M)"
                     /note="Organ: mixed tissues from stomach, muscle,
                     olfactory tissue and trunk kidney; Vector: pDNR-Lib;
                     Site_1: Sfi IA; Site_2: Sfi IB"
BASE COUNT          208 a          153 c          135 g          239 t
ORIGIN      
        1 aaaaatgtac agtttattaa gggtgtttaa tacaaaaata cagaaactcg aaagtcaatt
       61 catatgttga ctggcagtct ccctctttaa aatgatctgc tccatgtcta gtacacactc
      121 gaaagtgatt tgaaatcaaa aggagacaaa agacagaaga ttaagatgca atctcatgac
      181 atttgaacca agaattatca gtaacacagt tgtgtttaac gcgtggtgga attacacatc
      241 gatattttta accagttaaa aatacgattc aaccaattta cgtatcataa tttaattatt
      301 gcgtgtactg atcatatctg gaacaatggg tagatcatta cttaactcaa agattttccc
      361 tcataagtca gatctttcgg aagccacatt gtagactatt ttctccaact gattaccagt
      421 cagtaatagt atttttagct gtctatatgg ttacaacttt tcgtgagccg caagctgttg
      481 aatgttggga accactgcaa aaacgcatgc tagtcccaat gtgtccactg gctattttga
      541 cttcgtgtca gtcttctcgt tggctttttt ctgtttctgc tgcattatct ctgcatccct
      601 ctgcttgcga gcagctgcgg aaagaccatc atccttcctg cccttgccat gctcattttg
      661 cttcttggcg ttcttctggc gggcaagttc acgctggttt ctccagctgt taaagatggt
      721 ctacaagttt gacca
//