LOCUS GH664522 787 bp mRNA linear EST 19-MAY-2010 DEFINITION CBZA38103.b1 CBZA: Normalized channel catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 2, AUL_M) Ictalurus punctatus cDNA 5' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION GH664522 VERSION GH664522.1 DBLINK BioSample: SAMN00164693 KEYWORDS EST. SOURCE Ictalurus punctatus (channel catfish) ORGANISM Ictalurus punctatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 787) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..787 /organism="Ictalurus punctatus" /mol_type="mRNA" /db_xref="taxon:7998" /clone_lib="SAMN00164693 CBZA: Normalized channel catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 2, AUL_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 214 a 195 c 182 g 196 t ORIGIN 1 ggatttcagg acgcagttta cgtgggatag atctgcagtc atcatgtggc tgcagttatg 61 tttgggactg tttgcttttt tcctggtcca agctacgcat cctaccttga aaacccccaa 121 aaagcttgat cctgaagtca acatgaatat tagtgagatc atcagacact ggggttatcc 181 ggcggaagag tttgaagtgg tcaccgagga cggctacatc ctgagcatca acaggatccc 241 acacggcgtc cagggtaaat tccagcaaga ccccaagcct gtggtgtacc ttcagcatgg 301 gctcctggct gcaggaagta actgggtgac taaccttccc aacaccagcc ttggcttttt 361 gctagccgac gctggatttg acgtgtggct tggaaacagc cgtgggaaca cctggtcaaa 421 aaaacacgtc agcctcacgc ctaagcaaaa agagtactgg caatttagtc atgatgaaat 481 ggctaagaag gaccttccag cagtaataaa cttcatcacg aaaaccacaa gacaagagca 541 gattttctat gttggccatt ctcagggaac caccattgcc tttatggctt tttccacaat 601 gccggagctg gctaacaaaa tcaagatgtt ttttgcactg gcccctgtag ccacagtagc 661 cttcacagaa agtccaatgg gcagactgag tatcctccca gagtttgtca tctgggaaat 721 tattcgggaa caaagacttt ttacctcaga gtgccctcat caaatttttt gccacccata 781 tctgcag //