LOCUS FX983162 1916 bp mRNA linear TSA 13-JAN-2017
DEFINITION TSA: Reticulitermes speratus RsCAT1 mRNA for putative catalase,
complete cds, contig: comp783914_c0_seq4.
ACCESSION FX983162
VERSION FX983162.1
DBLINK BioProject:PRJDB3531
Sequence Read Archive:DRR030795, DRR030796, DRR030797, DRR030798,
DRR030799, DRR030800, DRR030801, DRR030802, DRR030803, DRR030804,
DRR030805, DRR030806, DRR030807, DRR030808, DRR030809, DRR030810,
DRR030811, DRR030812, DRR030813, DRR030814, DRR030815, DRR030816,
DRR030817, DRR030818, DRR030819, DRR030820, DRR030821, DRR030822,
DRR030823, DRR030824, DRR030825, DRR030826, DRR030827, DRR030828,
DRR030829, DRR030830, DRR030831, DRR030832, DRR030833, DRR030834,
DRR030835, DRR030836, DRR030837, DRR030838, DRR030839, DRR030840,
DRR030841, DRR030842, DRR030843, DRR030844, DRR030845, DRR030846,
DRR030847, DRR030848, DRR030849, DRR030850, DRR030851, DRR030852,
DRR030853, DRR030854
BioSample:SAMD00026264, SAMD00026265, SAMD00026266, SAMD00026267,
SAMD00026268, SAMD00026269, SAMD00026270, SAMD00026271,
SAMD00026272, SAMD00026273, SAMD00026274, SAMD00026275,
SAMD00026276, SAMD00026277, SAMD00026278, SAMD00026279,
SAMD00026280, SAMD00026281, SAMD00026282, SAMD00026283,
SAMD00026284, SAMD00026285, SAMD00026286, SAMD00026287,
SAMD00026288, SAMD00026289, SAMD00026290, SAMD00026291,
SAMD00026292, SAMD00026293, SAMD00026294, SAMD00026295,
SAMD00026296, SAMD00026297, SAMD00026298, SAMD00026299,
SAMD00026300, SAMD00026301, SAMD00026302, SAMD00026303,
SAMD00026304, SAMD00026305, SAMD00026306, SAMD00026307,
SAMD00026308, SAMD00026309, SAMD00026310, SAMD00026311,
SAMD00026312, SAMD00026313, SAMD00026314, SAMD00026315,
SAMD00026316, SAMD00026317, SAMD00026318, SAMD00026319,
SAMD00026320, SAMD00026321, SAMD00026322, SAMD00026323
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Reticulitermes speratus
ORGANISM Reticulitermes speratus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea;
Blattoidea; Termitoidae; Rhinotermitidae; Reticulitermes;
Frontotermes.
REFERENCE 1 (bases 1 to 1916)
AUTHORS Tasaki,E., Kobayashi,K., Iuchi,Y. and Matsuura,K.
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2016) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihito Iuchi
Yamaguchi University, Graduate School of Agriculture; Oji yoshida
1677-1, Yamaguchi, Yamaguchi 753-8515, Japan
REFERENCE 2
AUTHORS Tasaki,E., Kobayashi,K., Matsuura,K. and Iuchi,Y.
TITLE An Efficient Antioxidant System in a Long-Lived Termite Queen
JOURNAL PLoS ONE 12, e0167412 (2017)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0167412
REFERENCE 3
AUTHORS Mitaka,Y., Kobayashi,K., Mikheyev,A., Tin,M.M.Y., Watanabe,Y. and
Matsuura,K.
TITLE Caste-Specific and Sex-Specific Expression of Chemoreceptor Genes
in a Termite.
JOURNAL PLoS ONE 11, e0146125 (2016)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pone.0146125
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. trinityrnaseq_r2012-04-27
Sequencing Technology :: illumina Hiseq2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1916
/db_xref="taxon:60591"
/mol_type="mRNA"
/note="contig: comp783914_c0_seq4"
/organism="Reticulitermes speratus"
CDS 40..1704
/codon_start=1
/gene="RsCAT1"
/product="putative catalase"
/protein_id="BAV93782.1"
/transl_table=1
/translation="MQKQKHLVTLHKREYIYRGHNVCSLLFGVYSKDLCSYLGTMIVN
YCFLFLMLCCVICKRDPASEQLSTYKLSKTGKSHILTGYGVPINSKESSLTVGPHGPM
LLQDVEFLDELAHFDRERIPERVVHAKGAGAFGYFEVTNDITRYTKSTVFETVGKRTP
IAVRFSTVGGESGSADTVRDPRGFAIKFYTDDGLWDLVGNNTPIFFVRDPLLFPLFIH
TQKRNPATHLKDADMFWDFISLRPETTHQVMILFSDRGIPDGFRHMHGYGSHTFKMVN
ATNDAVYVKFHYKTDQGIKNLLAEEAANLTAIDPDYGLRDLYNAIAEGNFPSWTFYIQ
VMTFEEAERFHWNPFDLTKVWPHAEYPLIPVGKLVLNRNPTDYFAEVEQIAFSPAHMI
PGIEPSPDKMLQGRLFSYGDTQRHRLGANYLQIPVNCPFQTHVTNYQRDGPQTMNHHG
GAPNYYPNSFGGPENAPGLQRPIFSVSGNVARYNSSDEDNFSQPTLFWRNVLKPDEKE
RMVENIVSHLKNAAGFIQDQTVHMFSHVDKEFGNKMAEGLKKYVDL"
BASE COUNT 565 a 407 c 430 g 514 t
ORIGIN
1 acgcagagta catgggggta tgaggtaagc ctgaatggga tgcagaagca aaaacatctc
61 gtgaccttgc ataagaggga gtatatatac agaggtcata acgtctgtag cttactattc
121 ggtgtctatt cgaaggatct gtgttcttat ttgggcacca tgattgtgaa ttactgtttt
181 ttgtttttaa tgctttgttg tgttatttgt aaacgagacc cggcatcaga gcagttgagc
241 acttacaaat tgtcgaagac tgggaagtcc catattctga cagggtatgg tgtgccaatc
301 aatagtaagg aatccagctt gactgttggg cctcatggcc ctatgctgct gcaggatgtc
361 gagtttctgg atgaacttgc tcactttgat cgggagcgca taccagagag agtagttcat
421 gccaaaggtg caggtgcttt tggctacttt gaagtaacaa atgatatcac cagatacacc
481 aaatccactg tttttgaaac agtaggcaaa cggactccca ttgcagtgcg attctcaact
541 gtcggcggtg agagtggttc tgctgataca gttagggatc ctcgaggttt tgccataaag
601 ttctacacag atgatggatt atgggaccta gtggggaaca acacacctat tttctttgta
661 cgagatccgt tgctgtttcc tctatttatc cacacgcaaa aaaggaatcc tgctacacac
721 ctcaaggatg ctgacatgtt ctgggacttc atatctctgc gccctgaaac cacacatcaa
781 gtgatgatcc tcttttcaga caggggaatt ccagatggct ttcgacacat gcatggctat
841 ggctctcaca cattcaagat ggtaaatgcc accaatgatg ctgtctatgt caaatttcac
901 tacaagacag accaaggcat caaaaattta cttgcagaag aggctgcaaa tcttacagcc
961 attgatccag actatggact gcgtgacttg tacaatgcta ttgcagaggg aaacttccct
1021 agttggactt tctacatcca ggtgatgacc tttgaagaag ctgagagatt ccattggaac
1081 ccttttgatc tcaccaaggt gtggcctcat gctgaatacc cactgattcc tgtcggcaag
1141 ttggttttga atcgaaaccc cacagactac tttgcagaag tcgagcagat tgccttcagt
1201 ccagcccaca tgatcccggg cattgaaccc agcccagaca aaatgctaca gggtcgactg
1261 ttttcatatg gtgacacaca gcgccaccgt cttggtgcca actatcttca aattccagta
1321 aactgcccat tccaaacgca tgtgacaaac taccagagag atgggccgca aacaatgaat
1381 caccacggag gggcaccaaa ttactacccc aacagctttg gggggccaga aaatgcgcca
1441 ggacttcaga gaccgatatt ctcagtgtct gggaatgttg ccaggtataa ttcctcagat
1501 gaggacaact tcagtcagcc cactcttttc tggaggaatg tcctgaagcc agatgagaaa
1561 gaaaggatgg tggaaaacat tgtcagccat cttaaaaatg ctgcaggttt tatacaggat
1621 cagactgtac acatgttcag ccacgtagat aaagagtttg gaaacaagat ggctgaaggc
1681 ctaaagaaat atgtggactt gtgaatttga tccagagtca acttcagggc gagacattca
1741 aaagaagtca gatcagatgt acctttcagg agtaaatttc ctcttgtcat atttgtcata
1801 tgatgataat tcaattataa atttatgaac tatttactat tgactacctg gccaattaat
1861 tagtagacaa atgtgttaat aaaactgttt tctcaagtaa aaaaaaaaaa aaaaaa
//