LOCUS FF108975 679 bp mRNA linear EST 03-APR-2008
DEFINITION CJAD-aaa12f04.b2 Caenorhabditis_japonica_EST_CJAD1 Caenorhabditis
japonica cDNA similar to ref|NP_510484.1| Putative N-myristoylated
membrane protein, with a transmembrane domain, of bilaterial origin
(17.6 kD) [Caenorhabditis elegans] pir|T21142 hypothetical protein
F20D1.1 - Caenorhabditis elegans emb|CAB01743.1| Hypothetical
protein, mRNA sequence.
ACCESSION FF108975
VERSION FF108975.1
DBLINK BioSample: SAMN00165472
KEYWORDS EST.
SOURCE Caenorhabditis japonica
ORGANISM Caenorhabditis japonica
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 679)
AUTHORS Mitreva,M., Fulton,L., Becker,M., Ronko,I., Theising,B., Martin,J.,
Kiontke,K., Spieth,J. and Wilson,R.
TITLE WashU Caenorhabditis japonica EST Project
JOURNAL Unpublished
COMMENT Contact: Makedonka Dautova Mitreva
WashU Nematode EST Project
Washington University School of Medicine
4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108
Tel: 314 286 1800
Fax: 314 286 1810
Email: submissions@watson.wustl.edu
Library material provided by Karin Kiontke(kk52@nyu.edu), New York
University Library constructed by Irina Ronko and Dr. Makedonka
Mitreva Library sequenced by Washington University Genome
Sequencing Center Contact Dr. Makedonka Mitreva
(mmitreva@watson.wustl.edu) for information about this clone.
This trace has been recalled with phred
original value before phred recall for SL was 83
original value before phred recall for SR was 902.
FEATURES Location/Qualifiers
source 1..679
/organism="Caenorhabditis japonica"
/mol_type="mRNA"
/db_xref="taxon:281687"
/clone_lib="SAMN00165472
Caenorhabditis_japonica_EST_CJAD1"
/lab_host="DH10B cells"
/note="Vector: pDONR222; Site_1: BsrgI; Site_2: BsrgI; The
library was created by Irina Ronko at Washington
University, St. Louis using Cloneminer cDNA library
construction kit from Invitrogen. Size fractionation was
done with columns provided."
BASE COUNT 175 a 129 c 144 g 231 t
ORIGIN
1 gtacaaaaaa gttgggtttg agctaatttt atttcaacgc caaaaatggg ggcagcagca
61 tcgggagtga gcactcaaat gcaagccgag catgatccaa atgcgtcctt tccatggtgg
121 gtgcgatttt tggcgaaagg tgtagcgatt ctcggaggtg tattgtcatt gttcttcggt
181 gttctgggat tgataacact atctgcaact tgcatgatcg caattcttct tcaaatgact
241 tcgggcgctc ttataattgc tctagaagca ccattctgtt gtcaatttgt cgatttcatt
301 gagaaaattt cccgcttcag cgagtcgcgt caactttggc acaaagctgt catttatgga
361 attatgggac ttgtgccaat tttcctgtgc attgtactaa acacaatctt gggaagtgga
421 acaatttttg catctggagt aatttacggt ttcatggctc ttggcaaaaa agcagaccgt
481 agcaacatga tggccgcagg tgatcctgcc tggagcccac aagtcaatca atccaatata
541 ccgtaatcag tattcagcga ttcctctttc tttgaaacaa aatgtgaatt tttcatctta
601 attatttatt tttccatgtg ctttattctg gcgtttaatt tatgatatct ttttttattg
661 cattaaatag tttgagttt
//