LOCUS FD156128 626 bp mRNA linear EST 19-MAY-2010 DEFINITION CBZC23873.b1 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, XP_001339936.1, PREDICTED: similar to gastric mucin [Danio rerio], mRNA sequence. ACCESSION FD156128 VERSION FD156128.1 DBLINK BioSample: SAMN00164690 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 626) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..626 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164690 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 180 a 149 c 133 g 164 t ORIGIN 1 aggtatcgaa tcactcgtgg tgataccagc aatcgatgct caggtcacct tcactggcat 61 gatgtttttc atcaacctcc catggcaaaa gttccatgga aacactgaag gacagtgtgg 121 aacatgtaat aataaccgta ccgaggattg tcgcctacca aatggcacca ttatttcctc 181 ctgtgaaaaa atggctccat attggcatgt cagtaataac aacagtgtct gtctaccacc 241 aaaccccaaa ccaacaccag tgccatgcac aaatgctcca atttgcgaaa ttcttagcac 301 tacctttaag gaatgccacg agtttgtccc gtaccagtat tatgaggagg cctgcaacta 361 tgacgtgtgc cacatgaaca cccagagcat tggttgttcc agtttgcaga tgtacgctga 421 acagtgtgct atagcaggaa tctgcatcga ctggaggcca gccacaaatg gagtgtgtga 481 attcttctgc gaggagccca aagtctataa agcttgtgga cctcagattc cattaacttg 541 tgatttaagg tttaacctca aatttataaa cacacccagt gcatttagtc ctttggaaag 601 tatgttctgg gaaggctgct actgtc //