LOCUS FD155975 770 bp mRNA linear EST 19-MAY-2010 DEFINITION CBZC23786.b1 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, XP_001339936.1, PREDICTED: similar to gastric mucin [Danio rerio], mRNA sequence. ACCESSION FD155975 VERSION FD155975.1 DBLINK BioSample: SAMN00164690 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 770) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..770 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164690 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 244 a 172 c 153 g 201 t ORIGIN 1 tacaatgtga gtgatcatga tggatggtgc tatgttgcat tttgcaacca gacagagcac 61 aatgcatgtg tacctcatac acatgtatat cactgtggtt caactacaca agcgccaacc 121 acgagccaca tgaaaccttg cgataagcca tctctgaagc atggagagac tataccagat 181 ggaaaatgct ccaatattac atgcaacaat ggagtaatca tacatgagca tatgaaatgt 241 caggatgcac ctttgcctgt ttgtgtaaac aatcacctgc cgaagaaagt cactgatgag 301 tctgggtgtt gttccaaata tgaatgcgag tgtatatgca gtggctttgg agatccacat 361 tacatcactt ttgatggaac atactaccca tttcaaggaa actgctccta tgtccctgtc 421 aaagagataa atccaaaata ccacttcagt gtcattatcg acaacgtcta ctgtgactca 481 gaagatggtc tctcctgtcc taaatcactg actgttcact acaaatcctt taaaattttc 541 atgacgcagg atatttccaa cggaatggtc ataaatctga ttaaggtcaa caacaaccga 601 gtcctactac catatgagaa tgaggacttc cgaattacag acaatggtat cgaatcactc 661 gtggtgatac cagcaatcga tgcacaggtc accttcactg gcatgatgtg tttcatcaac 721 ctcccatggc aaaagttcca tggaaacact gaaggacagt gtggaacatg //