LOCUS FD150687 645 bp mRNA linear EST 20-MAY-2010 DEFINITION CBZC20928.b1 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION FD150687 VERSION FD150687.1 DBLINK BioSample: SAMN00164690 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 645) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..645 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164690 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 173 a 158 c 160 g 154 t ORIGIN 1 ggggtgaaaa tgacatcgct ttgagtttcg gaggatttca ggacgcagtt tacgtggtat 61 agatctgcag tcatcatgtg gctacagtta tgtttgggac tgtttgcttt tttcctggtc 121 caagctacgc agcctacctt gaaaaccccc aaaaagctcg atcctgaagt caacatgaat 181 attagtgaga tcatcagaca ctggggttat ccggcggaag ggttcgaagt ggtcaccgag 241 gacggctaca tcctgagcat caacaggatc ccacacggcg tccagggtaa attccagcaa 301 gaccccaagc ctgtggtgta ccttcagcat gggctcctgg ctgcaggaag taactgggtg 361 actaaccttc ccaacaccag ccttggcttt ttgctagccg acgctggaat ttgacgtgtg 421 gcttggaaac agccgtggga acacctggtc aagaaaacat gtcagcctca cgcctaacca 481 aaaagagtac tggcaattta gtcatgatga aatggctaag aaggaccttc cagcagtaat 541 aaacttcatc acaaaaacca caggacaaga gcagattttc tatgtcggcc attctcaggg 601 aaccaccatt gcctttatgg ctttttccac aatgccggag ctggc //