LOCUS FD140637 762 bp mRNA linear EST 19-MAY-2010 DEFINITION CBZC10618.b1 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, XP_001339936.1, PREDICTED: similar to gastric mucin [Danio rerio], mRNA sequence. ACCESSION FD140637 VERSION FD140637.1 DBLINK BioSample: SAMN00164690 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 762) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..762 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164690 CBZC: Normalized blue catfish cDNA library from stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 4, AUJ_M)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 228 a 186 c 152 g 196 t ORIGIN 1 cacttcagtg tcattatcga caacgtctac tgcgactcag aagatggtct ctcctgtcct 61 aaatcactga cagttcacta caaatccttt aaaattttca tgacgcagga tatttccaac 121 ggaatggtca taaatctgat taaggtcaac aacaaccgag tcctaccacc atatgagaat 181 gaggacttcc gaattacaga caatggtatc gaatcactcg tggtgatacc agcaatcgat 241 gcacaggtca ccttcactgg catgatgttt ttcatcaacc tcccatggca aaagttccat 301 ggaaacactg aaggacagtg tggaacatgt aataataacc gtaccgagga ttgtcgccta 361 ccaaatggca ccattatttc ctcctgtgaa aaaatggctc catattggca tgtcagtaat 421 aacaacagtg tctgtctacc accaaacccc aaaccaacac cagtgccatg cacaaatgct 481 ccaatttgtg aaattcttag cactaccttt aaggaatgcc acgagtttgt cccgtaccag 541 tattatgagg aggcctgcaa ctatgacgtg tgccacatga acacccagag cattggttgt 601 tccagtttgc agatgtacgc tgaacagtgc gctatagcag gaatctgcat cgactggagg 661 ccagccacaa atggagtgtg tgaattcttc tgcgaggagc ccaaagtcta taaagcttgt 721 ggacctcaga ttccattaac ttgtgattta aggtttaacc tc //