LOCUS FD093311 637 bp mRNA linear EST 19-MAY-2010 DEFINITION CBFH31957.b1 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION FD093311 VERSION FD093311.1 DBLINK BioSample: SAMN00164684 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 637) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..637 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164684 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue, and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 175 a 144 c 150 g 168 t ORIGIN 1 ggggaagtgt ttgaaagaaa tgtctgctct gaaagtagaa agaaccaaac atggatcaag 61 atgctatgct taattgctga cctgatcttt ttgtgtcttt gtagccttta tggctttttc 121 cacaatgccg gagctggcta acaaaatcaa gatgtttttt gcactggccc ctgtagccac 181 agtagccttc acagaaagtc caatgggcag actgagtatc ctcccagagt ttgtcatctg 241 gaaattattc gggaacaaag actttttacc tcagagtgcc ctcatcaaat tttttgccac 301 ccatttctgc agcaaggaac caatcagcgt gttgtgtgga aacatatttt tccttttgtg 361 tggttttgat gaaagaaacc tgaacatgac ccgaacggct gtgtacacga cacactgccc 421 agctggaacc tctgtccaga acatggtgca ctggtctcag gctgtaaagt ataggaaatt 481 gatggcatat gactacggaa aagctggaaa tattgctcat tataatcagt caacccctcc 541 tctgtacaac gtgcgggaca tgacggtgcc aacagcggtg tggtccgggg gacacgacac 601 gctggcagac caaaaggacg tggcattact gctcaca //