LOCUS FD078455 597 bp mRNA linear EST 19-MAY-2010 DEFINITION CBFH19622.b1 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION FD078455 VERSION FD078455.1 DBLINK BioSample: SAMN00164684 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 597) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..597 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164684 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue, and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 164 a 149 c 142 g 142 t ORIGIN 1 aggaagcagt ttacgtggta tagatctgca gtcatcatgt ggctacagtt atgtttggga 61 ctgtttgctt ttttcctggt ccaagctacg cagcctacct tgaaaacccc caaaaagctc 121 gatcctgaag tcaacatgaa tattagtgag atcatcagac actggggtta tccggcggaa 181 gagttcgaag tggtcaccga ggacggctac atcctgagca tcaacaggat cccacacggc 241 gtccagggta aattccagca agaccccaag cctgtggtgt accttcagca tgggctcctg 301 gctgcaggaa gtaactgggt gactaacctt cccaacacca gccttggctt tttgctagcc 361 gacgctggat ttgacgtgtg gcttggaaac agccgtggga acacctggtc aagaaaacat 421 gtcagcctca cgcctaacca aaaagagtac tggcaattta gtcatgatga aatggctaag 481 aaggaccttc cagcagtaat aaacttcatc acaaaaacca caggacaaga gcagattttc 541 tatgttggcc attctcaggg aaccaccatt gcctttatgg ctttttccac aatgccg //