LOCUS FD067418 545 bp mRNA linear EST 18-MAY-2010 DEFINITION CBFH10490.b2 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ) Ictalurus furcatus cDNA 5' similar to zebrafish RefSeq, NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence. ACCESSION FD067418 VERSION FD067418.1 DBLINK BioSample: SAMN00164684 KEYWORDS EST. SOURCE Ictalurus furcatus (blue catfish) ORGANISM Ictalurus furcatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus. REFERENCE 1 (bases 1 to 545) AUTHORS Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E., Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L., Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M., Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P., Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B., Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L., Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J., Rokhsar,D. and Liu,Z. TITLE Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies JOURNAL Genome Biol. 11 (1), R8 (2010) PUBMED 20096101 COMMENT Contact: Liu ZJ The Fish Molecular Genetics and Biotechnology Laboratory, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences Auburn University 203 Swingle Hall, Auburn University, Auburn, AL 36849, USA Tel: 334 844 4054 Fax: 334 844 9208 Email: zliu@acesag.auburn.edu cDNA library sequencing: DOE Joint Genome Institute (http://www.jgi.doe.gov) Seq primer: M13 Forward. FEATURES Location/Qualifiers source 1..545 /organism="Ictalurus furcatus" /mol_type="mRNA" /db_xref="taxon:66913" /clone_lib="SAMN00164684 CBFH: Normalized blue catfish cDNA library of stomach, muscle, olfactory tissue, and trunk kidney (mixed tissue 4, AUJ)" /note="Organ: mixed tissues from stomach, muscle, olfactory tissue, and trunk kidney; Vector: pDNR-Lib; Site_1: Sfi IA; Site_2: Sfi IB" BASE COUNT 152 a 139 c 127 g 127 t ORIGIN 1 tatgattggg actgtttgct tttttcctgg tccaagctac gcagcctacc ttgaaaaccc 61 ccaaaaagct cgatcctgaa gtcaacatga atattagtga gatcatcaga cactggggtt 121 atccggcgga agagttcgaa gtggtcaccg aggacggcta catcctgagc atcaacagga 181 tcccacacgg cgtccagggt aaattccagc aagaccccaa gcctgtggtg taccttcagc 241 atgggctcct ggctgcagga agtaactggg tgactaacct tcccaacacc agccttggct 301 ttttgctagc cgacgctgga tttgacgtgt ggcttggaaa cagccgtggg aacacctggt 361 caagaaaaca tgtcagcctc acgcctaacc aaaaagagta ctggcaattt agtcatgatg 421 aaatggctaa gaaggacctt ccagcagtaa taaacttcat cacaaaaacc acaggacaag 481 agcagatttt ctatgttggc cattctcagg gaaccaccat tgcctttatg gctttttcca 541 caatg //