LOCUS       FD021816                 700 bp    mRNA    linear   EST 20-MAY-2010
DEFINITION  CBNI7810.b1 CBNI: Normalized channel catfish cDNA library from
            stomach, muscle, olfactory tissue and trunk kidney (mixed tissue 2,
            AUL) Ictalurus punctatus cDNA 5' similar to zebrafish RefSeq,
            NP_998569.1, lipase, gastric [Danio rerio], mRNA sequence.
ACCESSION   FD021816
VERSION     FD021816.1
DBLINK      BioSample: SAMN00164687
KEYWORDS    EST.
SOURCE      Ictalurus punctatus (channel catfish)
  ORGANISM  Ictalurus punctatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
            Ictaluridae; Ictalurus.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Wang,S., Peatman,E., Abernathy,J., Waldbieser,G., Lindquist,E.,
            Richardson,P., Lucas,S., Wang,M., Li,P., Thimmapuram,J., Liu,L.,
            Vullaganti,D., Kucuktas,H., Murdock,C., Small,B.C., Wilson,M.,
            Liu,H., Jiang,Y., Lee,Y., Chen,F., Lu,J., Wang,W., Xu,P.,
            Somridhivej,B., Baoprasertkul,P., Quilang,J., Sha,Z., Bao,B.,
            Wang,Y., Wang,Q., Takano,T., Nandi,S., Liu,S., Wong,L.,
            Kaltenboeck,L., Quiniou,S., Bengten,E., Miller,N., Trant,J.,
            Rokhsar,D. and Liu,Z.
  TITLE     Assembly of 500,000 inter-specific catfish expressed sequence tags
            and large scale gene-associated marker development for whole genome
            association studies
  JOURNAL   Genome Biol. 11 (1), R8 (2010)
   PUBMED   20096101
COMMENT     Contact: Liu ZJ
            The Fish Molecular Genetics and Biotechnology Laboratory,
            Department of Fisheries and Allied Aquacultures and Program of Cell
            and Molecular Biosciences
            Auburn University
            203 Swingle Hall, Auburn University, Auburn, AL 36849, USA
            Tel: 334 844 4054
            Fax: 334 844 9208
            Email: zliu@acesag.auburn.edu
            cDNA library sequencing: DOE Joint Genome Institute
            (http://www.jgi.doe.gov)
            Seq primer: M13 Forward.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Ictalurus punctatus"
                     /mol_type="mRNA"
                     /db_xref="taxon:7998"
                     /clone_lib="SAMN00164687 CBNI: Normalized channel catfish
                     cDNA library from stomach, muscle, olfactory tissue and
                     trunk kidney (mixed tissue 2, AUL)"
                     /note="Organ: mixed tissues from stomach, muscle,
                     olfactory tissue and trunk kidney; Vector: pDNR-Lib;
                     Site_1: Sfi IA; Site_2: Sfi IB"
BASE COUNT          195 a          176 c          160 g          169 t
ORIGIN      
        1 gagagtttga agtggtcacc gaggacggct acatcctgag catcaacagg atcccacacg
       61 gcgtccaggg taaattccag caagacccca agcctgtggt gtaccttcag catgggctcc
      121 tggctgcagg aagtaactgg gtgactaacc ttcccaacac cagccttggc tttttgctag
      181 ccgacactgg atttgacgtg tggcttggaa acagccgtgg gaacacctgg tcaaaaaaac
      241 acgtcagcct cacgcctaag caaaaagagt actggcaatt tagtcatgat gaaatggcta
      301 agaaggacct tccagcagta ataaacttca tcacgaaaac cacaagacaa gagcagattt
      361 tctatgttgg ccattctcag ggaaccacca ttgcctttat ggctttttcc acaatgccgg
      421 agctggctaa caaaatcaag atgtttttgc actggcccct gtagccacag tagccttcac
      481 agaaagtcca atgggcagac tgggtatcct cccagagttt gtcatctgga aattattcgg
      541 gaacaaagac tttttacctc agagtgccct catcaaattt tttgccaccc atatctgcag
      601 caaggaacca atcggcgtgt tgtgtggaaa catatttttc cttttgtgtg gttttgatga
      661 aagaaacctg aacatgaccc gaacgcctgt gtacacgacc
//