LOCUS FC456613 538 bp mRNA linear EST 13-NOV-2008 DEFINITION Ssh-drought9 Soybean nodule 5 days after drought library Glycine max cDNA similar to unknown function protein homologue to adenine nucleotide translocator, mRNA sequence. ACCESSION FC456613 VERSION FC456613.1 DBLINK BioSample: SAMN00164565 KEYWORDS EST. SOURCE Glycine max (soybean) ORGANISM Glycine max Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja. REFERENCE 1 (bases 1 to 538) AUTHORS Clement,M., Lambert,A., Herouart,D. and Bomcompagni,D. TITLE Identification of new up-regulated genes under drought stress in soybean nodules JOURNAL Gene 426 (1-2), 15-22 (2008) PUBMED 18817859 COMMENT Contact: Boncompagni E UMR Interactions Plantes Microrganismes INRA (1064) CNRS (6192) Universite de Nice Sophia Antipolis 400 route des Chappes, BP 167, Sophia antipolis cedex, F-06903, FRANCE Tel: 00 33 4 92 38 66 34 Fax: 00 33 4 92 38 66 40 Email: boncompa@unice.fr Insert Length: 538 Std Error: 0.00 Seq primer: T7. FEATURES Location/Qualifiers source 1..538 /organism="Glycine max" /mol_type="mRNA" /cultivar="Labrador" /db_xref="taxon:3847" /clone_lib="SAMN00164565 Soybean nodule 5 days after drought library" /dev_stage="mature soybean, six weeks old" /note="Organ: nodule; SSH method was used to isolate gene specifically up-regulated in response to drought in soybean nodule. mRNA were extracted from control plant and from drought stressed (5 days without watering) plant. cDNA obtained after subtraction were cloned into pGEMT vector and sequenced with the T7 primer." BASE COUNT 125 a 118 c 124 g 171 t ORIGIN 1 gtaccaaaga ccctcttttg ggaattactc gaatgctgca ttgcagtatc ctgtgatgcc 61 ctcatgcaaa gctactatgg atttgtctgc tgctgcaaca attgcctccc ccgtctttgt 121 tgctgctcca gcagagaaag gccattttct tatagacttt ctcatgggag gtgtttcagc 181 agctgtctca aaaactgctg ctgctcccat tgaacgtgtt aagcttttga tccagaacca 241 ggatgagatg atcaaaactg gtagactttc tgagccctac aagggtattg gtgattgctt 301 taagagaaca atggcagatg agggtgctat ttctctatgg agaggaaaca ctgctaatgt 361 tatccgttat ttccccaccc aggctttgaa ctttgcattt aaggattact tcaagaggct 421 tttcaacttt aagaaggata gagatggcta ctggaaatgg tttgctggca acttggcctc 481 tggtggtgct gctggtgcat catccctttt gtttgtttac tctcttgact atgcccgt //