LOCUS EU015404 1707 bp cRNA linear VRL 01-JAN-2008 DEFINITION Influenza A virus (A/Indonesia/TLL002/2006(H5N1)) hemagglutinin gene, complete cds. ACCESSION EU015404 VERSION EU015404.1 KEYWORDS . SOURCE Influenza A virus (A/Indonesia/TLL002/2006(H5N1)) ORGANISM Influenza A virus (A/Indonesia/TLL002/2006(H5N1)) Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae. REFERENCE 1 (bases 1 to 1707) AUTHORS He,F., Du,Q., Ho,Y. and Kwang,J. TITLE Immunohistochemical detection of H5 AIV in formalin-fixed tissues JOURNAL Unpublished REFERENCE 2 (bases 1 to 1707) AUTHORS He,F., Ho,Y. and Kwang,J. TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) Animal Health Biotechnology, Temasek Life Sciences Laboratory, 1 Research Link, NUS, Singapore 117604, Singapore FEATURES Location/Qualifiers source 1..1707 /organism="Influenza A virus (A/Indonesia/TLL002/2006(H5N1))" /mol_type="viral cRNA" /strain="A/Indonesia/TLL002/2006" /serotype="H5N1" /host="Homo sapiens" /db_xref="taxon:472506" /segment="4" /country="Indonesia" CDS 1..1707 /codon_start=1 /product="hemagglutinin" /protein_id="ABW74702.1" /translation="MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTH AQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPT NDLCYPGSFNDYEELKHLLSRINHFEKIQIIPKSSWSDHEASSGVSSACPYLGSSSFF RNVVWLIKKNSTYPTIKKSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISIGT STLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKG DSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLR NSPQRESRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAID GVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMEN ERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECIESIRNGTYNYPQY SEEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMMAGLSLWMCSNGSLQCRI CI" BASE COUNT 606 a 312 c 380 g 409 t ORIGIN 1 atggagaaaa tagtgcttct tcttgcaata gtcagtcttg ttaaaagtga tcagatttgc 61 attggttacc atgcaaacaa ttcaacagag caggttgaca caatcatgga aaagaacgtt 121 actgttacac atgcccaaga catattggaa aagacacaca acgggaagct ctgcgatcta 181 gatggagtga agcctctaat tttaagagat tgtagtgtag ctggatggct cctcgggaac 241 ccaatgtgtg acgaattcat caatgtaccg gaatggtctt acatagtgga gaaggccaat 301 ccaaccaatg acctctgtta cccagggagt ttcaacgact atgaagaact gaaacaccta 361 ttgagcagaa taaaccattt tgagaaaatt cagatcatcc ccaaaagttc ttggtccgat 421 catgaagcct catcaggagt gagttcagca tgtccatacc tgggtagttc ctcctttttt 481 agaaatgtgg tatggcttat caaaaagaac agtacatacc caacaataaa gaaaagctac 541 aataatacca accaagaaga tcttttggta ctgtggggga ttcaccatcc taatgatgcg 601 gcagagcaga caaggctata tcaaaaccca accacctata tttccattgg gacatcaaca 661 ctaaaccaga gattggtacc aaaaatagct actagatcca aagtaaatgg gcaaagtgga 721 aggatggagt tcttctggac aattttaaaa cctaatgatg caatcaactt cgagagtaat 781 ggaaatttca ttgctccaga atatgcatac aaaattgtca agaaagggga ctcagcaatt 841 atgaagagtg aattggaata tggtaactgc aacaccaagt gtcaaactcc aatgggggcg 901 ataaactcta gtatgccatt ccacaacata caccctctca ccatcgggga atgccccaaa 961 tatgtgaaat caaacagatt agtccttgca acagggctca gaaatagccc tcaaagagaa 1021 agcagaagaa aaaagagagg actatttgga gctatagcag gttttataga gggaggatgg 1081 cagggaatgg tagatggttg gtatgggtac caccatagca atgagcaggg gagtgggtac 1141 gctgcagaca aagaatccac tcaaaaggca atagatggag tcaccaataa ggtcaactca 1201 atcattgaca aaatgaacac tcagtttgag gccgttggaa gggaatttaa caacttagaa 1261 aggagaatag agaatttaaa caagaagatg gaagacgggt ttctagatgt ctggacttat 1321 aatgccgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1381 gttaagaacc tatacgacaa ggtccgacta cagcttaggg ataatgcaaa ggagctgggc 1441 aacggttgtt tcgagttcta tcacaaatgt gataatgaat gtatagaaag tataagaaat 1501 ggaacatata actacccgca gtattcagaa gaagcaagat taaaaagaga ggaaataagt 1561 ggagtaaaat tggaatcaat aggaacttac caaatactgt caatttattc aacagtggcg 1621 agttccctag cactggcaat catgatggct ggtctatctt tatggatgtg ctccaatgga 1681 tcgttacaat gcagaatttg catttaa //