LOCUS DQ854812 1379 bp mRNA linear HUM 25-JUL-2008 DEFINITION Homo sapiens visual system homeobox 1 transcript variant 6 (VSX1) mRNA, complete cds. ACCESSION DQ854812 VERSION DQ854812.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1379) AUTHORS Hosseini,S.M., Herd,S., Vincent,A.L. and Heon,E. TITLE Genetic analysis of chromosome 20-related posterior polymorphous corneal dystrophy: genetic heterogeneity and exclusion of three candidate genes JOURNAL Mol. Vis. 14, 71-80 (2008) PUBMED 18253095 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1379) AUTHORS Hosseini,S.M. and Heon,E. TITLE VSX1 revisited: the role of VSX1 in chromosome 20 related corneal dystrophies JOURNAL Unpublished REFERENCE 3 (bases 1 to 1379) AUTHORS Hosseini,S.M. and Heon,E. TITLE Direct Submission JOURNAL Submitted (14-JUL-2006) Program in Genetics and Genomic Biology, The Hospital for Sick Children Research Institute, 101 College Street, Toronto, Ontario M5G 1L7, Canada FEATURES Location/Qualifiers source 1..1379 /db_xref="H-InvDB:HIT000393893" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IV-1" /tissue_type="retina" /dev_stage="adult" gene 1..1379 /gene="VSX1" CDS 36..941 /gene="VSX1" /codon_start=1 /product="visual system homeobox 1 transcript variant 6" /protein_id="ABI23978.1" /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLVQTSAPG GSRSLDFAGDTQAPQTPWWCLMTFS" BASE COUNT 268 a 436 c 406 g 269 t ORIGIN 1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg 61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc 121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc 181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg 241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg 301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc 361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc 421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag 481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga 541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc 601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac 661 aggtctggtt tcaaaaccgc agggccaaat ggcgcaagcg ggagaagcgc tggggcggca 721 gcagcgtgat ggccgagtac gggctgtacg gggccatggt gcgccactgc atcccgctgc 781 cagactccgt gctcaactcc gccgagggcg gcctgctggg ctcctgcgcg ccctggctcc 841 tggtgcaaac ttctgctcct ggaggctccc gttcactgga ctttgcagga gacacacagg 901 ctccccagac cccgtggtgg tgcctgatga ccttcagctg aaccctgtaa tgctgctaaa 961 gtctgcccct ctggagaagt gctcaggtag cattgttctg cctcaggaag catgccgatt 1021 ttcctgtgtc atccttgatg atcactgcta ccagacttgc cccctgcagg gcaccccatg 1081 tgcaaggaat tcaacaacct aggagttgaa agcattggtc tcccaagttc agtgtgttct 1141 tttccgtatc tattaccagc tgatgagaat aaacctgcag tcatgacagc taggtcctag 1201 tgacaggtgc agaaagctgc tcttacagaa actcccctcc ttattaagag gctttgtcta 1261 tcactcggaa ctgcttctac tcaagattat ctgttgaaag ggaactgtcc ataccagggc 1321 attgttctga cttttctgga cttcctcaac ccaaaatgcc ttgaagaaaa aaaaaaaaa //