LOCUS       DQ655994                1165 bp    mRNA    linear   HTC 13-AUG-2007
DEFINITION  Homo sapiens clone Affy08254G11, mRNA sequence.
ACCESSION   DQ655994
VERSION     DQ655994.2
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R.,
            Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S.,
            Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R.,
            Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J.,
            Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A.
  TITLE     Prominent use of distal 5' transcription start sites and discovery
            of a large number of additional exons in ENCODE regions
  JOURNAL   Genome Res. 17 (6), 746-759 (2007)
   PUBMED   17567994
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
            Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
            Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
            Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
            Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
            Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
            Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
            Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
            Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
            Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
            Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
            Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
            Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
            Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
            Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
            Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
            Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
            Gingeras,T.R.
  CONSRTM   ENCODE Consortium
  TITLE     Long Distance and Global Transcription Networks Characterize ENCODE
            Regions
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1165)
  AUTHORS   Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
            Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
            Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
            Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
            Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
            Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
            Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
            Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
            Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
            Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
            Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
            Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
            Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
            Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
            Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
            Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
            Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
            Gingeras,T.R.
  CONSRTM   ENCODE Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2006) National Human Genome Research Institute,
            Bethesda, MD 20892, USA
REFERENCE   4  (bases 1 to 1165)
  AUTHORS   Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
            Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
            Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
            Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
            Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
            Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
            Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
            Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
            Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
            Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
            Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
            Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
            Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
            Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
            Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
            Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
            Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
            Gingeras,T.R.
  CONSRTM   ENCODE Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2007) National Human Genome Research Institute,
            Bethesda, MD 20892, USA
  REMARK    Sequence update by submitter
COMMENT     On Aug 13, 2007 this sequence version replaced DQ655994.1.
FEATURES             Location/Qualifiers
     source          1..1165
                     /db_xref="H-InvDB:HIT000393107"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /clone="Affy08254G11"
                     /note="obtained by 5' RACE"
     misc_feature    1..1165
                     /note="similar to CLDN12"
BASE COUNT          326 a          258 c          262 g          319 t
ORIGIN      
        1 tacactgcat agtcaaatga aaagactggt ctcaaacttc ttgttcagat ggatgttata
       61 aaagatgacc cagatagatg gggagaggct cacagtacct gccaggaaaa atagcagccc
      121 agccaccagg tggcaacctg cactattgac cagacacttg gccagtttga tgttgggcac
      181 cgaggacctg aaggcagtgt tgcacattcc aatcaggcag agcagcaggg cacccatggc
      241 gatcagcatg ctgaggggta gggcaaactg gaggacacgc aggtccagct ggtcaactga
      301 tgagtaccaa gtagtgtcgt acatcaggca gtcactgctc ccgtcatacc gggcacattt
      361 cacccacagg cctgtgtaaa cagtcaggtt cttctcgttt ctgttgaatg tgatcaatcg
      421 taattttctc cagttgggaa gcagagtccc tgcaaagagg cctgctactg aggcgattcc
      481 acacaggaag gaaaggactg tggctgcgtg gacatcccga cagcccatgg caggcaagct
      541 tgtggagtac tgtcagtcag atagctcact gaccttgggc cagattcaga acttccctgt
      601 gcctcgtttt cttcatctgt gaaatggaaa aaataacagt gccaaccttg cagggttgtt
      661 gctttgaggt acctgacagt tccaaaacag ctttattcag cttagaagag acacatgaag
      721 atctgaatac agagtagcaa taatctgagc atgtcctcca ggttgtcaca gatgaaagga
      781 tttccttgtt tttaagcatt aaatactgtt ccatcaatac catttttaat atatttaaat
      841 tatatccatt ttggaagtag taacagcatg ctttgatggt ggctcagtag aagacattgt
      901 atcagaaatc cacaaattaa gcaactgttt cttatgaagt gcatcatttt cctggttggc
      961 ctgttcatcc agtgactttc ttatacaatt ccttaattct tcgattcctt ctccagtaac
     1021 tgcagatatg gggatgatat gttggaactc tacagtcctc tctggaatca tgtttttttc
     1081 aaataaatgc agaaaatcat acaccctact tttcctcatt tgtgcatgag gttctctact
     1141 agactctgaa tgaaacaagc attga
//