LOCUS DF144343 123502 bp DNA linear CON 02-OCT-2015 DEFINITION Clonorchis sinensis DNA, scaffold: 1516, strain: Henan. ACCESSION DF144343 BADR02000000 VERSION DF144343.1 DBLINK BioProject:PRJDA72781 BioSample:SAMD00036587 KEYWORDS WGS; IMPROVED_HIGH_QUALITY_DRAFT. SOURCE Clonorchis sinensis ORGANISM Clonorchis sinensis Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis. REFERENCE 1 (bases 1 to 123502) AUTHORS Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F., Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J., Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X., Hu,X., Liang,C., Xu,J., Wu,Z. and Yu,X. TITLE Direct Submission JOURNAL Submitted (19-OCT-2011) to the DDBJ/EMBL/GenBank databases. Contact:Xiao Yun Wang Zhongshan School of Medicine, Sun Yat-sen University, Department of Parasitology; 74th Zhongshan 2nd Road, Guangzhou 510080, China REFERENCE 2 AUTHORS Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F., Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J., Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X., Hu,X., Liang,C., Wu,Z., Lahn,B., Xu,J., Li,X. and Yu,X. TITLE The genome and transcriptome of Clonorchis sinensis provide novel insights into parasitism of the carcinogenic liver fluke JOURNAL Unpublished (2011) REFERENCE 3 AUTHORS Wang,X., Chen,W., Huang,Y., Sun,J., Men,J., Liu,H., Luo,F., Guo,L., Lv,X., Deng,C., Zhou,C., Fan,Y., Li,X., Huang,L., Hu,Y., Liang,C., Hu,X., Xu,J. and Yu,X. TITLE The draft genome of the carcinogenic human liver fluke Clonorchis sinensis JOURNAL Genome Biol. 12, R107 (2011) REMARK Publication Status: Online-Only COMMENT ##Genome-Assembly-Data-START## Finishing Goal :: Improved High-Quality Draft Current Finishing Status :: Improved High-Quality Draft Assembly Method :: Celera assembler v. 6.1 Assembly Name :: C_sinensis-2.0 Genome Coverage :: 72x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..123502 /db_xref="taxon:79923" /mol_type="genomic DNA" /note="scaffold: 1516" /organism="Clonorchis sinensis" /strain="Henan" CDS join(46402..46502,54420..54582,59298..59516,64914..65084) /codon_start=1 /locus_tag="CLF_111377" /note="hypothetical protein K01081 5'-nucleotidase [EC:3.1.3.5]" /product="5'-nucleotidase" /protein_id="GAA56693.1" /transl_table=1 /translation="MIEWWRLSHESIVSCGLHRDALAKTVRECGLVLRDGVHEFTELL RFHQTPLLIFSAGLGDVIELLLESFSMYTENVRVVSNFMQFNDEGLLVGFTDPIIHSF NKTAASIVNGDYARLSSQRPCVLLLGDSTGDVHMADGATVDDPTGISGTVLRIGFLNE AVEANLEKYKTLYDIVLVNDDTFAVPLAVMKSILQCHQAVADGLAAPSTNNTDDVER" CDS complement(join(68570..68652,71369..71546,73959..74108, 75829..75963,92046..92195,92890..93198,94773..>94967)) /codon_start=1 /locus_tag="CLF_111378" /product="beta-secretase 1" /protein_id="GAA56694.1" /transl_table=1 /translation="QSFSVIGSSPEEMNGLILIGGTNLTGMTQTVDTILYTPVREPWF YEVVLTDLRVEEQSVVEDCKELNVEFSIVDSGTTNIQVPERVFQPLLGHIKTYVAKQS SSTAAMLQNYASFWTGASMLCETSSDNQIGGATGLPYTLFPVIEFQMLALEADVNKKA LSLTLSPQQYIRFVGRHPKNGVTRDCFAFGIRPHHSGTILGAVFLEGFFTVFHRDSLK VGFGNSTCNRYSNVSTVTSSMVNGVRAWKSSIGRKTPSECAFYRPVQLRITDKLDGLI HHRLRYCRFVNWIVNLRLHWENHEERKILVLSMAIGRHTSMPMRRTLERLQNPGVQIA SDENLTDLEYADDIVLIFEEEEKAQVFLDELTKVIPSFVFRSYGIDFHLRNKMPVKNG KYGFLLL" CONTIG join(BADR02003363.1:1..123502) //