LOCUS       DF144343              123502 bp    DNA     linear   CON 02-OCT-2015
DEFINITION  Clonorchis sinensis DNA, scaffold: 1516, strain: Henan.
ACCESSION   DF144343 BADR02000000
VERSION     DF144343.1
DBLINK      BioProject:PRJDA72781
            BioSample:SAMD00036587
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT.
SOURCE      Clonorchis sinensis
  ORGANISM  Clonorchis sinensis
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes;
            Trematoda; Digenea; Opisthorchiida; Opisthorchiata;
            Opisthorchiidae; Clonorchis.
REFERENCE   1  (bases 1 to 123502)
  AUTHORS   Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F.,
            Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J.,
            Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X.,
            Hu,X., Liang,C., Xu,J., Wu,Z. and Yu,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2011) to the DDBJ/EMBL/GenBank databases.
            Contact:Xiao Yun Wang
            Zhongshan School of Medicine, Sun Yat-sen University, Department
            of Parasitology; 74th Zhongshan 2nd Road, Guangzhou 510080, China
REFERENCE   2
  AUTHORS   Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F.,
            Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J.,
            Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X.,
            Hu,X., Liang,C., Wu,Z., Lahn,B., Xu,J., Li,X. and Yu,X.
  TITLE     The genome and transcriptome of Clonorchis sinensis provide novel
            insights into parasitism of the carcinogenic liver fluke
  JOURNAL   Unpublished (2011)
REFERENCE   3
  AUTHORS   Wang,X., Chen,W., Huang,Y., Sun,J., Men,J., Liu,H., Luo,F.,
            Guo,L., Lv,X., Deng,C., Zhou,C., Fan,Y., Li,X., Huang,L., Hu,Y.,
            Liang,C., Hu,X., Xu,J. and Yu,X.
  TITLE     The draft genome of the carcinogenic human liver fluke Clonorchis
            sinensis
  JOURNAL   Genome Biol. 12, R107 (2011)
  REMARK    Publication Status: Online-Only
COMMENT     ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Celera assembler v. 6.1
            Assembly Name            :: C_sinensis-2.0
            Genome Coverage          :: 72x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..123502
                     /db_xref="taxon:79923"
                     /mol_type="genomic DNA"
                     /note="scaffold: 1516"
                     /organism="Clonorchis sinensis"
                     /strain="Henan"
     CDS             join(46402..46502,54420..54582,59298..59516,64914..65084)
                     /codon_start=1
                     /locus_tag="CLF_111377"
                     /note="hypothetical protein K01081 5'-nucleotidase
                     [EC:3.1.3.5]"
                     /product="5'-nucleotidase"
                     /protein_id="GAA56693.1"
                     /transl_table=1
                     /translation="MIEWWRLSHESIVSCGLHRDALAKTVRECGLVLRDGVHEFTELL
                     RFHQTPLLIFSAGLGDVIELLLESFSMYTENVRVVSNFMQFNDEGLLVGFTDPIIHSF
                     NKTAASIVNGDYARLSSQRPCVLLLGDSTGDVHMADGATVDDPTGISGTVLRIGFLNE
                     AVEANLEKYKTLYDIVLVNDDTFAVPLAVMKSILQCHQAVADGLAAPSTNNTDDVER"
     CDS             complement(join(68570..68652,71369..71546,73959..74108,
                     75829..75963,92046..92195,92890..93198,94773..>94967))
                     /codon_start=1
                     /locus_tag="CLF_111378"
                     /product="beta-secretase 1"
                     /protein_id="GAA56694.1"
                     /transl_table=1
                     /translation="QSFSVIGSSPEEMNGLILIGGTNLTGMTQTVDTILYTPVREPWF
                     YEVVLTDLRVEEQSVVEDCKELNVEFSIVDSGTTNIQVPERVFQPLLGHIKTYVAKQS
                     SSTAAMLQNYASFWTGASMLCETSSDNQIGGATGLPYTLFPVIEFQMLALEADVNKKA
                     LSLTLSPQQYIRFVGRHPKNGVTRDCFAFGIRPHHSGTILGAVFLEGFFTVFHRDSLK
                     VGFGNSTCNRYSNVSTVTSSMVNGVRAWKSSIGRKTPSECAFYRPVQLRITDKLDGLI
                     HHRLRYCRFVNWIVNLRLHWENHEERKILVLSMAIGRHTSMPMRRTLERLQNPGVQIA
                     SDENLTDLEYADDIVLIFEEEEKAQVFLDELTKVIPSFVFRSYGIDFHLRNKMPVKNG
                     KYGFLLL"
CONTIG      join(BADR02003363.1:1..123502)
//