LOCUS DF142933 785891 bp DNA linear CON 02-OCT-2015
DEFINITION Clonorchis sinensis DNA, scaffold: 106, strain: Henan.
ACCESSION DF142933 BADR02000000
VERSION DF142933.1
DBLINK BioProject:PRJDA72781
BioSample:SAMD00036587
KEYWORDS WGS; IMPROVED_HIGH_QUALITY_DRAFT.
SOURCE Clonorchis sinensis
ORGANISM Clonorchis sinensis
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes;
Trematoda; Digenea; Opisthorchiida; Opisthorchiata;
Opisthorchiidae; Clonorchis.
REFERENCE 1 (bases 1 to 785891)
AUTHORS Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F.,
Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J.,
Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X.,
Hu,X., Liang,C., Xu,J., Wu,Z. and Yu,X.
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2011) to the DDBJ/EMBL/GenBank databases.
Contact:Xiao Yun Wang
Zhongshan School of Medicine, Sun Yat-sen University, Department
of Parasitology; 74th Zhongshan 2nd Road, Guangzhou 510080, China
REFERENCE 2
AUTHORS Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F.,
Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J.,
Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X.,
Hu,X., Liang,C., Wu,Z., Lahn,B., Xu,J., Li,X. and Yu,X.
TITLE The genome and transcriptome of Clonorchis sinensis provide novel
insights into parasitism of the carcinogenic liver fluke
JOURNAL Unpublished (2011)
REFERENCE 3
AUTHORS Wang,X., Chen,W., Huang,Y., Sun,J., Men,J., Liu,H., Luo,F.,
Guo,L., Lv,X., Deng,C., Zhou,C., Fan,Y., Li,X., Huang,L., Hu,Y.,
Liang,C., Hu,X., Xu,J. and Yu,X.
TITLE The draft genome of the carcinogenic human liver fluke Clonorchis
sinensis
JOURNAL Genome Biol. 12, R107 (2011)
REMARK Publication Status: Online-Only
COMMENT ##Genome-Assembly-Data-START##
Finishing Goal :: Improved High-Quality Draft
Current Finishing Status :: Improved High-Quality Draft
Assembly Method :: Celera assembler v. 6.1
Assembly Name :: C_sinensis-2.0
Genome Coverage :: 72x
Sequencing Technology :: Illumina
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..785891
/db_xref="taxon:79923"
/mol_type="genomic DNA"
/note="scaffold: 106"
/organism="Clonorchis sinensis"
/strain="Henan"
CDS join(16902..16967,25979..26349,38427..38543,43069..43467,
44097..44161,44777..44866,46025..46398,48998..49221,
49310..49604,50034..50486,50575..51220,53340..53416,
54536..54589)
/codon_start=1
/locus_tag="CLF_102559"
/old_locus_tag="CLF_008970"
/product="DNA-binding protein RFX7"
/protein_id="GAA32555.2"
/transl_table=1
/translation="MWSKTKEELIDCESSLVKVRTKVLDSIKYCFSPDARARVDSLVQ
EVASLKDIEKLLFCLLLPIDNNGGQHSFIGSALTLHPEDTDLPGHGFELSTLGVGLFS
PGGSSSLHLSNQVEQSQAYTWIMSHLEEHPSTCLRKDEVYEDYRAYCDKHHMKTLNTA
DFGKVMKRAFPNVKPRRLGQRGQSRYCYGGMRKKMEVQPPFLPDLTDEALGMSAQGRS
TTSPASSSETSGELGSHRRRISSTSPLTRLLCANGSELDHAVWADEPGVRSALGVRGS
VVSDVAHILLEYAQQVFGVQFQSLFHLAQHLVSNRYVNSRSRRFCKADEKDLQPFTIV
FVYREGLPKSAFDRVTNGRRKSGGDRPPYLKPEESIPSTSDLSRTPTRHTQVPGSPAP
VSTPTAHHPVTATAQSPLLGGTNRGFSTDATPSASLSDLSSSHLPPCSTPQPSYRPYQ
ANFSPQASLPPSCLGGGLYAAAAALASQTGVPSSCSPYLFNSGRGDSSALKNSSAAVA
LAAAAAAAARQAGLPHFNSNSTPSGYSASMGIIPGRSSPIPPASQFDVLTPPTAHKEK
ATSFPAPSTPGSNPSETPYHQIAGYHSPVGGSGTIYAAHQQTPPYTSLQHTPAPLPPG
VGARSPYTPTANPGTAVSDTTQSTFKRSIPPHPVEAPGAYEPSPRFHLGGQSPNKRAR
YLSTASGGSSGTTPLSAECPPLSSGSTADSMDAPFGDPSSGMAHGSVSSSSPASSAGS
STRGASQQPTPLSMGPGYASQLGTGESQSGTIASPYYSSRYEGLEMRSPAPHHHHHQM
DRVNRLPNMTAAPLDSSLWGTSSASRNPNKISVTPGSTTNQQGYGPTTTDARPSGTVF
RPPVTPFILELEEDDDLTNMPRLGASPGPQIPPSSPTEFLPFYSEAASKSVQAKRKLC
GSHTTKSRPGSEGEECGSGTGSSCSPGGASLGTDSNEFRTFVSSHLETPPSSALMPSA
TGQLCSDSLVSPDSPTSDNSCDRTLTNFDQYGEVNTPPMPEGLASAPSPSDMLATDAL
VQQRQELQSELSTPGPADSDRSLALKPELTPATSRSNPSDVGIPAF"
CDS complement(join(78482..78574,83140..83246,87935..88070,
90871..91368,95777..96082))
/codon_start=1
/locus_tag="CLF_102560"
/product="WD repeat-containing protein 86"
/protein_id="GAA49130.1"
/transl_table=1
/translation="MGSTSSTLVCTEPVQKCEGHSAGVNCLAVSTSQQLIASGSDDCT
IRLWKIHVGDRLALSCDQILAGHTHYVTAVLFHREMLISGAADHTLKKWNPTSGACLI
TFEGHEDVINTIVCAGNRILSGSNDKSVIVWNFDTGKLENQLKGHSHKVSAITYSGLD
AAEKSEDHSGSTQQEQETTVTLVSQFKPRECIFTGSADRHAKAWSVRSGKCTLTFKGH
AGAITRIRVDATGRLLYTASLDGTVRSWYAETAKPQFVFDGHKSAVVCMDLCDKMLYT
GSADRTARSWLLETGTQLRKYLGAKKTIIEVRSDGDRLVTASDDGHVRVYDKNTGVLQ
TVFGNSLSQCINAFEMTPTCFITTANDGFLYLWGIQEAKAGTVED"
CDS complement(join(115574..115645,117164..117388,
118732..118900,121754..121842,125933..126147,
132009..132156))
/codon_start=1
/locus_tag="CLF_102561"
/product="mitochondrial uncoupling protein 4"
/protein_id="GAA49131.1"
/transl_table=1
/translation="MLKTRIQVFAELRNQRSHPGICKLAWATIRTEGFFQLWQGLSPA
LVRHLIYTGSRVPVYELIRRDVFDLPPAAHFTVKSDGTEKNYPPPDQNPGFVVRAALA
GVMAGAFAQFLASPTDLVKVRLQTEMKWRTEAALSAFESSVPSSSASPKRLSFVGCLK
QLYSEGGPTALWRGGLANVQRAALVNMGELTTYDTAKRWFAIRFRLKDGPLLHICAST
MSGFVAALLGTPADLIKTRIMNQRGPLQSNELLYNGVADCAYKIVKTEGFLALYKGFF
LIWARLAPWSLTFWLTYEKIRTVCGVGGF"
CDS join(144777..144812,150608..150783,152807..152969,
153816..154019,156139..156285)
/codon_start=1
/locus_tag="CLF_102562"
/note="hypothetical protein K01081 5'-nucleotidase
[EC:3.1.3.5]"
/product="5'-nucleotidase"
/protein_id="GAA49132.1"
/transl_table=1
/translation="MPLGSGGTLLRAWEDTLEFYLPIERDLTMPDVKKAPQMVEFWNK
AHDLLVQANLHQSLMKSVMQHSRIVLREHVHTFLRLLREHGVPVLVFSAGIGDIIETV
LEQEDLCSDNLRILSNFMDFDSEGNLTGFRSPLVHMLNKTIRDLPELQELCSFPDAST
LLLLGDSVADTRMVDEQHVPSEVTLKIGFLNEPGDESLALYKSIYDVVLVEDETFRVP
LMILELLLCAPKPDGAKDNKLES"
CDS join(194015..194219,194257..194364,194400..194616,
194656..194736,194777..195097,196704..196836,
197201..197387,199548..199584,205098..205198,
205582..205674,206695..206910,207118..207145,
207558..207686,209247..209349,209667..209775,
209899..209969,212326..212414,213362..213441,
215082..215281)
/codon_start=1
/locus_tag="CLF_102563"
/note="chromatin regulatory protein sir2 K08098
phosphatidylinositol glycan class Z [EC:2.4.1.-]"
/product="phosphatidylinositol glycan class Z"
/protein_id="GAA49133.1"
/transl_table=1
/translation="MSVGYASGLSEYANKGVCGLPEFFDDTITLESKIDELHRLMVES
AYTVVHTGAGISTPVGIPDFRGPKGVWTLEKLGEKPTVSVSFEKAMPSLAHRILVELE
RKNLIQYLITQNIDGLHFRSGFPRNRLSILHGDMFLEVCDTCGSFFARSTPSTTMGLR
RTDVFCTYTKPSGRGCRGRLCDTILDWESDLPELDYHLAIEHSNRADLHICIGTSLQM
YPAASLPLLPRRSSTSASACNKIRKRDPENNLSSHRSKLVIINLQKTKLSKRANLNIH
APADVVLDAIAKKFHLAISSTVPSSDIFVPMLLLRSVHSTPTDSIPWRVFPHPTAGSL
VQLLESLVSPKTEPIHSSTDPPGYIHPDEFFQSVEISAGDVYGLEVFRSWEFLPHGSG
PLRSIAGIGPMAHLPIWLYKRLLDGDHFVASVRYATSSSRVAWHLTSVVVTRIRISAK
KAHTVCRFHQLLKGSLAAMELPENPVSATVIIDCRNRRIAEFYLRPIRCSKSQHFIPV
SKLLSADGCGSHFICHPFATGATVNDKSRFCDDHIILHCASSTKYSVTNPVSAPHIQS
DPSLIKVCKSRYRTSNGHYVSILTNTDYREQRSDDQQLLIQGTYCNSSEFTTRLLSIR
YNSKESFKHPRVNAADVNQYVSQPPSKFMQTLRILSAASLNQQALNNSRDCVPPLVDN
RYAAATPGAGTFSGRPRILSRMHTYGGSNSVSFSVFPYTRFLTVLPTTPACYTTDCCE
SNNRTMPLFGQPCAHPDYNSRHYRKVTGSVNLAMGYCAASVGNSHPESNQCEPIWYTV
SSDLRTGFDTFTCLTDFIDGRILEPLSNLLSTDDTSS"
CDS join(270305..270503,274691..274834,277476..279194,
280811..281013)
/codon_start=1
/locus_tag="CLF_102564"
/old_locus_tag="CLF_004354"
/product="monocarboxylate transporter 13"
/protein_id="GAA30291.2"
/transl_table=1
/translation="MRLRVQFLNRGRAWICDICAFLLVGMHYGILNCGSLYYPGMAEA
TGYPISVVIWLVTGQFAIAFCFAPVYNKILDMIPYCIATSAAAVLTSIGIITATFLHN
YFAFMIPFTIVGGIGLGISLVRVLAIVAEHFDRYRVFALALAASGAGFGTFVYSALGA
QLIETFTWRVALMIIGALHLNIIPLNLVLRLLPPEPFRQTNTLVANQPNLSTSEGEKK
RSQSGTILSLSGFSIMSKPDGVASPAQSVCSQQTDTSPRNLKVVVEFFQASETIVDQS
HVPMSSLTLFSEANEEILDMIRQLANETPAEAEIEPRQTLIPIVFVFGKIRNSGLFDL
GQLQNLWKPVVFRDGFAVAMMSKYDRSQVWLRRAESRIQELTHEFNAQDIGVSPARIL
VMINRLDNQMQSEYPNFGSGDRPGVRFVYDSSGESPTLKEAESDDVRTDGTRAEDKPE
ADTNPIINAKTSHVSSIPSLSATSRGLTIPTNSSVELSMVRGRTTDMTEPINNPEDSV
NYPTPKPEAIEPKSCETAAAQKNMPNFIQLDLMFLSFLLSRTIGYITDSVVLAHLSNF
GLSLGFGTDEASRLLTYVGVTAMLGRFFNAFVGQLVPNLDMRIYISVCMFLLSTGMII
MPSYPTKQVLSAFAIVYGFLMSPSFVLAPGLTYEIIGPERYEVGVAFLFQFEAMGFLI
GGPVGGIIKEISDRYYECFMFGAAAGFITGLILVSQRLWLSLRFHQCLSQGKKVSNEM
SSETNGDVTVAVHP"
CDS 304486..305592
/codon_start=1
/locus_tag="CLF_102565"
/note="hypothetical protein K06269 protein phosphatase 1
catalytic subunit [EC:3.1.3.16]"
/old_locus_tag="CLF_026739"
/product="protein phosphatase 1 catalytic subunit"
/protein_id="GAA43205.1"
/transl_table=1
/translation="MVGRKKKWRASKVNSILKNLLQRAVKRGEKADISEPEILEITDQ
VCDVLLEDPVCLDLDLKEPICIVGDLFGQYMDLIEIFEVFGFPPGRRYLFLGNYCDRG
PQSLEVICILFILKLKFPKHIFMLRGNHECEYISCHYGFLADCTKRFSKQVWHGFMTA
FNCLPATAIIENIIFCAHSGLVPCLQYTSYTSVGQLKDYINDVIRRPVPLTQNFLLTQ
LAWSEPVIDTRVRCSNPAGLGDWFGEKEVEEFCDRFGLELFIRSHDFVKTGYEFMANG
KLLTVFSASHFGGIFQNLGAVVMLEKGHRKKTIFGRITVIRPTPQLTRVVSSYTPIVS
YDSREYQAHREAHRDRLSIVESYAATRGTYVFFT"
CDS join(309645..309683,314642..314876,318743..318886,
320315..322204,322757..322956)
/codon_start=1
/locus_tag="CLF_102566"
/old_locus_tag="CLF_027026"
/product="monocarboxylate transporter 7"
/protein_id="GAA36506.2"
/transl_table=1
/translation="MLSHRGSATEIKPNNQCEEVNMEPSSTKTSRMTDSGSSWIVAVF
SCIALAIHFGVINCGALLYPGLVDLTDMPVSALSWFVTGQYGMTFCFAPLYNRLHRYL
HFRIAIVGAALLTTVSLISASYVHSFAAFFILYTVIGGIGLGTSVVRIVGIAAERFDR
YRILALALCTCGAGLGTFIYSNLGGYMIEELTWRVALMGYAFLHLNIIPVSLLLRRLP
PEDVTEPAIILPDQVESSIQSCELTGAGRRMAFSDIFSSRSSVHGSGVLAAQKGASCP
QRLNESSRLITAARQLRAFVEFAKCHRVAETKDFNIDPLFFAPDPGASVMARIRDTCR
EYLTQLNNAMCNTVFVPVLFIVGELDAALTLLLNTKQERILTEQELNDLLTSQFELAL
NPEGENQESDSKTHVKPFVGDSISASVIIAQERKRARGIVRATVRRAETRAYELCETL
SRNGLDVSPTPIIVLVEHAGDLMYNRLFQIHSCDRMHKISTSGLEKVEETDKSEGQQP
LNITSNTIMSERNLPSTMSIGSSILALSNFLSVGSQYLTNSHSKGLDNFLARRTNEFA
KDRRLSCFMLQLSDLLNSASSVYDLQEVSSRPIEDQTLSQVCTTQDKKSGSVLRNPLF
FSLLVTRLLVYVADSIIFAHLSYFALKSGLSEDQAASLLSSIGIASVFSRLGTGLIGQ
FVPRCDSRTMASCCLLVLATHTIVMPLCPTYVALSAFTIIYGVLLSPCSAFTPVMAYE
ITGPARYDEAVSYWFQFEAFGYLIGGPLGGLVKEVSNNYMDCFVLAGTCDLAAALIIF
IQGLILTRGAERLAVLFRTNCCHPVAGDTEQYNGSKV"
CDS complement(336707..337231)
/codon_start=1
/locus_tag="CLF_102567"
/product="hypothetical protein"
/protein_id="GAA49134.1"
/transl_table=1
/translation="MEVHDSHQRCGKFRIRGHYFQMKKTFPCAENVSRTDNNIHSETC
NSPSPSFKLPMNFVHCCPMDYVYAVYLGFVRRLASIFVNRHRPLRIRPPGLNRVKYTI
QLIRAYLPEDSPRKCRKITLNKQRKTTEYRQLLFYIGPIVFKGILPHERYQNFIDVFI
SVLDFPSSLLCFPS"
CDS join(340537..341223,343039..343224)
/codon_start=1
/locus_tag="CLF_102568"
/note="hypothetical LOC590823"
/product="hypothetical protein"
/protein_id="GAA49135.1"
/transl_table=1
/translation="MGQSWVLVDQVTINAPLGHSDHCVLTFDFICYWARNPEPQTWIR
NFCRADFSRMRIFLNQVKLGPASVEDLYRTIVLKVHEADAMFVPKKPARSRMSRKLPK
RIRRLLEKRSQLFFKKLTTGDTEDELAFRKMRNRCKSEIRQWNIRKQATILDLARKNR
NVLFKYMRHRRRNKPSAYSVRDRNGEPTSHPIVVSEFYRDHYAGLYSVPASSSHPTLS
RRTYDRPLTDLVPPQSQQHKRTTAFSADSALASSVYRRPPNWAPQEPLKNPRSDKRVH
QGSSRVSYGLYYDR"
CDS complement(join(372319..373299,378365..378538))
/codon_start=1
/locus_tag="CLF_102569"
/product="hypothetical protein"
/protein_id="GAA49136.1"
/transl_table=1
/translation="MNSGGPAQATLDGSAAEFVPSEELQQQINKRAAFLQVSKMIEPV
FLEKGKNFHSQLSQIRGLLSSTTVNAPYLVGEVIGSLTTSSPEHAPVGFRFFKELRSV
IPDHAGRELEAGLLKSVHETTRTMLTNNTFQQMVTKCATFTSAPAISSVCDEAGDLPK
QADDLTTTNRAFGLTAFLNLLITRLNLPESPEACVCTPPILPCVDLCQLVELACHVQA
GHPRAPSADEPVISELDIFNLRNWNGLFHQLCDSFYQSMMFFNCALMELNSRISDGTW
NHSGSLGDQHSKPGQIENGFEHGAQLSCLLTELLLRMRGLLLDEQIPLKVTRSTILDI
LLCANQLTALSFTNWPEASSVELGFSESEGDEVYESYQRFLEETKQVTPS"
CDS complement(378697..379065)
/codon_start=1
/locus_tag="CLF_102570"
/note="vacuolar ATP synthase subunit F K02151 V-type
H+-transporting ATPase subunit F [EC:3.6.3.14]"
/old_locus_tag="CLF_015091"
/product="V-type H+-transporting ATPase subunit F"
/protein_id="GAA40258.1"
/transl_table=1
/translation="MAISAARGKLIAVIGDEDTCTGFLLGGIGELDKNRRPNFFAVDK
DTSLSAIEEAFKSFIDRDDVAIILIVQTIAEMIRHLIDAHTSALPAVLEIPSKDNPYD
ASKDTILKRAKGLFSAEDFR"
CDS join(394642..394720,395541..395693,402557..402767,
402809..402946,402980..403109,403329..403541)
/codon_start=1
/locus_tag="CLF_102571"
/product="hypothetical protein"
/protein_id="GAA49137.1"
/transl_table=1
/translation="MSQMIALRRAILRVEAFFEFAKRIHGALTSLRPINHMVAESRYG
MINVHTHVHTCEYTFITVRAQLQRGHRFGIVDKGVGSTDIVISHSKANSSPASLDAPV
CAAVNSDVPSHVHQKSLDIAADYTHGYCPEVSFCDFRKQGFIQSDSEAQTPPFSCRPR
LKFAVRELPAWFEMTQNEKNQVYFLNHETQETTWFDPRIPVGHQKWGMTLDELQQVHI
NYARYLGQNPPNVGQYRPSVLNRLNYLEIGVSLQPSSYPKPENSFVTQFPPPHTRLVI
RFIAQYRRIPVLYDSGDCNVCLAFCLVAGQA"
CDS join(420819..420883,423760..423855,425023..425119,
436248..436388,438539..438650,453052..453182)
/codon_start=1
/locus_tag="CLF_102572"
/product="hypothetical protein"
/protein_id="GAA49138.1"
/transl_table=1
/translation="MSEQPNSCAHQRLPQVCTYHNSSIVYRPHGNRVKYSLKHARKFA
FPRLIQNRLNIFTSRMKLTRKKHIYRIKIKHAVAQPDVLSHTRQVLRRLPQVTFLSAD
PVPEFACLDHPLRQIRIAHIHPRLLTLIRFMHSHQGSMDSGVGQSLTGQSSASADQTP
EHAVMLFCDPKKFTHKRIMDISYKGTRQKLMHVRQCTRLFDGYFDNVLLLWFL"
CDS complement(join(721860..722016,724948..725073,
726605..726748,727609..>727778))
/codon_start=1
/locus_tag="CLF_102573"
/product="hypothetical protein"
/protein_id="GAA49139.1"
/transl_table=1
/translation="NTDCVRFALVHLGVRSTSTVDSRICECRIAERACSNTLFVTAVI
FDNSAATLNDIHQFNGFQTIGVLIRLPVTETTVVYDNGSLAPQPKVLPNSAPTDWMKF
TTMNYDKKDAEDCRRTMHIAHASSDEKSPRITPHQCDIVSFINPRINGEMGIQTFLLV
EIRKAFHYTQPRTNNVHSHRDEMLGSQLLSSTNRSTTI"
CDS complement(730005..733979)
/codon_start=1
/locus_tag="CLF_102574"
/product="transposon Ty3-G gap-Pol polyprotein"
/protein_id="GAA49140.1"
/transl_table=1
/translation="MSDTTTTQSSNTLLPQPTINAASVHLPPFWHHDPCIWFTQAQAQ
FALRGITQEHTMYYHVLAVLPPELAADLRDVLLNPDDTKPYTQLRNAIITRTSLSEHK
RLEQLISGETLDGCTPSQFLRRLYGILGDRKIDDALLKQLFLKRLPTHVQSILAPDTD
KVQLTQLANIADRILEIQPRSPNLNSLDTSTAVSSLHARIDELAQQIAAISFDRTPRR
RFTSPHQQRRRRASSVSRPSGYCWYHTQFGRFARKCTAPCSFRAPPSTDKTSIGKRTG
RTVEASSVPGLDYNTRRLLLLDRNSGLRFLVDTGADISVIPVTAANSKLTPSPLTLRA
ANGTCIKTYGQRVLDLILGLRREFRWFFIIADVHQPILGADFLTHHNLLVDLKRQILL
DATTQLVVRGKSTITPDICPITLSPHGSSRYHDLLREFPELLRPNFHQAELTHSVVHH
IDTRGTPVHARPRRLHPERLKIAKEEFQHMLQLGIIRPSKSVWASPLHMVPKKTTADW
RPCGDYRALNNITTPDRYPIPHIHDFTSNLAGCTIFSHVDILRAYHHIPIHPEDIHKT
AITTPFGLFEFLRMPFGLRNAAQTFQRFIDQVLSGLSFVFAYLDDILVASSSTEQHLE
HLRLLFTRLRDHGVVINAQKCIFGVSTLNFLGHTVNQDGISPTDDKLDAIRSFPLPTS
FKQLKRFLGMINFYRRFIPKAASLLAPLTNLLSGNPKTFHLTDSAISAFGQVKNSLMN
SFKLFYLQPNSVLSLNVDASNDAVGAVLQQTINNIHQPLAFFSHKLSPTESRYSTFGR
ELLAIYLSIRHFRHLLEGREFHVYTDHKPLTSALKATSDKYSPREIRHLDYISQFTND
IRHVSGHENIVADTLSRPTVDSVHRTPGIDLNRMAELQKKESSSTSSNSKSSLKIQSM
PLQTAPGTIECDIGTVNPRPLVPPSMRRQVFESLHNISHPSIRSTLKLISQRFVWPEM
NKDIREWTRTCLACQRSKVIRHTRSPVGTFAAPDSRFDHVHLDIVGPLPPSNDYSYIL
TVVDRFTRWPEAIPIKNISADTISRAFVGRWISTFGVPSYITTDRGSQFDCHLFRRLT
ELLGCTHIRTTAYNPQANGLVERFHRHLKSAIIANNDPNNWYDMLPVILLHLRTMFRS
SLHCSPAELVFGTTLRIPGEYFSSNVETPTNSLSYVNQLRENMSKFRYHSSRIPTSSS
YVPTDLSSCSHVFIRSDRVKKPLQPPYDGPYLVISRHPKYFIIQINNKSDTVSIDRLK
PAYTDFVDPAQLGKNTGDVKPKNNATEVPPEPTQAGSQKERCRTTRSGRHVHWPDRFV
PGKP"
assembly_gap 744774..744873
/estimated_length=unknown
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CDS 744895..>745341
/codon_start=1
/locus_tag="CLF_102575"
/note="hypothetical protein LOC100488659"
/product="hypothetical protein"
/protein_id="GAA49141.1"
/transl_table=1
/translation="MPLSQSHSVPYTEPDTAPPAVGPDLFNQLSTHPPPILKTPPRTP
TPASYYPTFSYQVPPVLNSTVSEVIKFLFSTVYSPTSLSIMLFNARSLLPKIHDLRAI
SAIAQPSVICVTETWLTDETPDTAVSLPGYDIHRSDRKNSRGGGCAI"
CDS join(759677..759862,773688..773970,775801..775956,
777149..777754,782198..782322)
/codon_start=1
/locus_tag="CLF_102576"
/old_locus_tag="CLF_035468"
/product="hypothetical protein"
/protein_id="GAA35659.2"
/transl_table=1
/translation="MSSFLSLSCSVQYLSREQLESLVRRLQDEVTDLRGRLAESEERN
RILQFALPQAIRECLTNTMESLKPLLSPALVNPTPSITVDAVSDNPSAQPVRSTRSVA
VQNDLSMDGGALVTNQQQCRGVSIPDTPLRPVLQELAHQVNSQESESPAGTRLSALEN
IKRCSQRMGERPRRRRPNLTRPTKRTYRGPRVGTRQASWTEHNPDVALRLTTHPFIKT
TASTLVPLTASPPHLPSIQPGLTITSAVSTFQTQTLPKLSFYTDSHEPETSSPGECLL
LGVEHHSRVQADTGTQWNTHVPENELQQQACDPAQQQQTNSNTDQNWLNLQDEFPGEI
DWSEYSRTKREIGENPSILLGRPWSMYKASSEWTRATCALMSALFDPEQLSTSTVLGR
GSSERRNRLPFDKVNYIVGTITQEFGVSPAKVRARMAQKCKDERRRVRMTSQTMGPDA
V"
CONTIG join(BADR02000459.1:1..744773,gap(unk100),BADR02000460.1:1..41018)
//